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RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Bos taurus (cattle) ]

Gene ID: 616166, updated on 4-Jul-2020

Summary

Official Symbol
RALGPS1provided by VGNC
Official Full Name
Ral GEF with PH domain and SH3 binding motif 1provided by VGNC
Primary source
VGNC:VGNC:33704
See related
BGD:BT18962; Ensembl:ENSBTAG00000023843
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See RALGPS1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
25
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 11 NC_037338.1 (97676247..97978878)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 11 AC_000168.1 (97674642..97710666) , (97780157..97975506)

Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 43 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene angiopoietin like 2 Neighboring gene GTPase activating Rap/RanGAP domain like 3 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC100847606

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193100.1NP_001180029.1  ras-specific guanine nucleotide-releasing factor RalGPS1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000011
    UniProtKB/TrEMBL
    E1BJI8
    Related
    ENSBTAP00000053854.2, ENSBTAT00000061364.3
    Conserved Domains (3) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:433548
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:432543
    PH; PH domain

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037338.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    97676247..97978878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024999171.1XP_024854939.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  2. XM_024999173.1XP_024854941.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X6

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  3. XM_024999172.1XP_024854940.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X6

    Related
    ENSBTAP00000061390.1, ENSBTAT00000081918.1
    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  4. XM_024999163.1XP_024854931.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  5. XM_024999174.1XP_024854942.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X7

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:460575
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  6. XM_024999168.1XP_024854936.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:460575
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  7. XM_024999180.1XP_024854948.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X13

    Related
    ENSBTAP00000062721.1, ENSBTAT00000074080.1
    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:391506
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  8. XM_024999177.1XP_024854945.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X10

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:391506
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  9. XM_024999181.1XP_024854949.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X14

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:390505
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  10. XM_024999178.1XP_024854946.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X11

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:390505
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  11. XM_024999170.1XP_024854938.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4

    Conserved Domains (2) summary
    smart00147
    Location:46258
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:431546
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  12. XM_024999179.1XP_024854947.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X12

    Conserved Domains (2) summary
    smart00147
    Location:46258
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:361476
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  13. XM_024999169.1XP_024854937.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    Conserved Domains (2) summary
    smart00147
    Location:38271
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:444559
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  14. XM_024999166.1XP_024854934.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  15. XM_024999175.1XP_024854943.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X8

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  16. XM_024999164.1XP_024854932.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  17. XM_024999165.1XP_024854933.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  18. XM_024999167.1XP_024854935.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (2) summary
    smart00147
    Location:46288
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:461576
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
  19. XM_024999176.1XP_024854944.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X9

    Conserved Domains (2) summary
    smart00147
    Location:1228
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:401516
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
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