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ACER3 alkaline ceramidase 3 [ Bos taurus (cattle) ]

Gene ID: 615110, updated on 14-Jan-2019

Summary

Official Symbol
ACER3provided by VGNC
Official Full Name
alkaline ceramidase 3provided by VGNC
Primary source
VGNC:VGNC:25538
See related
BGD:BT26679; Ensembl:ENSBTAG00000017218
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
PHCA
Orthologs

Genomic context

See ACER3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 15 NC_037342.1 (56246788..56404490)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 15 AC_000172.1 (57028500..57186798)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107133182 Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene heterogeneous nuclear ribonucleoprotein K pseudogene Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene calpain 5 Neighboring gene olfactory marker protein

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC179542

General protein information

Preferred Names
alkaline ceramidase 3
Names
phytoceramidase, alkaline
NP_001095755.1
XP_005216374.1
XP_024831300.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102285.1NP_001095755.1  alkaline ceramidase 3

    See identical proteins and their annotated locations for NP_001095755.1

    Status: PROVISIONAL

    Source sequence(s)
    BC151564
    UniProtKB/TrEMBL
    A7MBH7
    Related
    ENSBTAP00000051467.2, ENSBTAT00000052101.3
    Conserved Domains (1) summary
    pfam05875
    Location:9259
    Ceramidase; Ceramidase

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    56246788..56404490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024975532.1XP_024831300.1  alkaline ceramidase 3 isoform X2

    Conserved Domains (1) summary
    pfam05875
    Location:1217
    Ceramidase
  2. XM_005216317.4XP_005216374.1  alkaline ceramidase 3 isoform X1

    Conserved Domains (1) summary
    pfam05875
    Location:9295
    Ceramidase; Ceramidase
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