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POP4 POP4 homolog, ribonuclease P/MRP subunit [ Bos taurus (domestic cattle) ]

Gene ID: 614870, updated on 5-Sep-2025
Official Symbol
POP4provided by VGNC
Official Full Name
POP4 homolog, ribonuclease P/MRP subunitprovided by VGNC
Primary source
VGNC:VGNC:33164
See related
EnsemblRapid:ENSBTAG00070009635
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See POP4 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (40233528..40242999)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene hydrocephalus-inducing protein homolog Neighboring gene uncharacterized LOC132342831 Neighboring gene HYDIN axonemal central pair apparatus protein Neighboring gene chromosome 18 C19orf12 homolog Neighboring gene pleckstrin homology and FYVE domain containing 1 Neighboring gene microRNA mir-2901

Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC137348

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribonuclease P RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonuclease MRP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribonuclease P protein subunit p29
Names
POP4 (processing of precursor , S. cerevisiae) homolog
processing of precursor 4, ribonuclease P/MRP subunit
NP_001029942.1
NP_001106753.1
XP_024834259.1
XP_059732881.1
XP_059732882.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034770.1 → NP_001029942.1  ribonuclease P protein subunit p29 isoform 2

    See identical proteins and their annotated locations for NP_001029942.1

    Status: PROVISIONAL

    Description
    Transcript Variant: This variant (2) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    BT021479
    UniProtKB/TrEMBL
    F1N244, Q58DW8
    Related
    ENSBTAP00070012676.1, ENSBTAT00070021667.1
    Conserved Domains (1) summary
    pfam01868
    Location:90 → 172
    UPF0086; Domain of unknown function UPF0086

  2. NM_001113282.2 → NP_001106753.1  ribonuclease P protein subunit p29 isoform 1

    See identical proteins and their annotated locations for NP_001106753.1

    Status: PROVISIONAL

    Source sequence(s)
    BC112695
    UniProtKB/Swiss-Prot
    Q2KIB9
    UniProtKB/TrEMBL
    A0AAF6YJ89
    Conserved Domains (1) summary
    pfam01868
    Location:128 → 210
    UPF0086; Domain of unknown function UPF0086

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    40233528..40242999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059876898.1 → XP_059732881.1  ribonuclease P protein subunit p29 isoform X1

    UniProtKB/TrEMBL
    A0AAF6YJ89
    Related
    ENSBTAP00070012685.1, ENSBTAT00070021678.1

  2. XM_024978491.2 → XP_024834259.1  ribonuclease P protein subunit p29 isoform X2

    UniProtKB/TrEMBL
    F1N244, Q58DW8
    Conserved Domains (1) summary
    pfam01868
    Location:90 → 172
    UPF0086; Domain of unknown function UPF0086

  3. XM_059876899.1 → XP_059732882.1  ribonuclease P protein subunit p29 isoform X2

    UniProtKB/TrEMBL
    F1N244, Q58DW8
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KIB9.1 GenPept UniProtKB/Swiss-Prot:Q2KIB9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials