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RAB3IL1 RAB3A interacting protein like 1 [ Bos taurus (domestic cattle) ]

Gene ID: 614335, updated on 18-Aug-2024

Summary

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Official Symbol
RAB3IL1provided by VGNC
Official Full Name
RAB3A interacting protein like 1provided by VGNC
Primary source
VGNC:VGNC:33655
See related
BGD:BT24790; Ensembl:ENSBTAG00000015745
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 29
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (40417000..40464689, complement)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene fatty acid desaturase 1 Neighboring gene fatty acid desaturase 2 Neighboring gene fatty acid desaturase 3 Neighboring gene bestrophin 1 Neighboring gene ferritin heavy chain 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC128938

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi to plasma membrane transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide exchange factor for Rab-3A
Names
RAB3A interacting protein (rabin3)-like 1
guanine nucleotide exchange factor for Rab3A
rab-3A-interacting-like protein 1
rab3A-interacting-like protein 1
rabin3-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046532.1 → NP_001039997.1  guanine nucleotide exchange factor for Rab-3A

    See identical proteins and their annotated locations for NP_001039997.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105507
    UniProtKB/Swiss-Prot
    Q2KJ58
    UniProtKB/TrEMBL
    A0A3Q1LGV1
    Related
    ENSBTAP00000020909.5, ENSBTAT00000020909.6
    Conserved Domains (1) summary
    pfam06428
    Location:115 → 159
    Sec2p; GDP/GTP exchange factor Sec2p

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    40417000..40464689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024987310.2 → XP_024843078.1  guanine nucleotide exchange factor for Rab-3A isoform X13

    UniProtKB/TrEMBL
    A0A3Q1LF65
    Conserved Domains (1) summary
    pfam06428
    Location:121 → 165
    Sec2p; GDP/GTP exchange factor Sec2p

  2. XM_059883021.1 → XP_059739004.1  guanine nucleotide exchange factor for Rab-3A isoform X11

  3. XM_024987307.2 → XP_024843075.1  guanine nucleotide exchange factor for Rab-3A isoform X14

    UniProtKB/TrEMBL
    A0A3Q1MCS7
    Related
    ENSBTAP00000068180.2, ENSBTAT00000076278.2
    Conserved Domains (2) summary
    pfam05262
    Location:93 → 206
    Borrelia_P83; Borrelia P83/100 protein
    pfam06428
    Location:162 → 206
    Sec2p; GDP/GTP exchange factor Sec2p

  4. XM_059883017.1 → XP_059739000.1  guanine nucleotide exchange factor for Rab-3A isoform X5

  5. XM_005226944.3 → XP_005227001.1  guanine nucleotide exchange factor for Rab-3A isoform X10

    UniProtKB/TrEMBL
    A0A3Q1LGV1
    Conserved Domains (1) summary
    pfam06428
    Location:115 → 159
    Sec2p; GDP/GTP exchange factor Sec2p

  6. XM_059883018.1 → XP_059739001.1  guanine nucleotide exchange factor for Rab-3A isoform X6

  7. XM_059883020.1 → XP_059739003.1  guanine nucleotide exchange factor for Rab-3A isoform X9

    UniProtKB/TrEMBL
    A0A3Q1LGV1

  8. XM_059883016.1 → XP_059738999.1  guanine nucleotide exchange factor for Rab-3A isoform X4

  9. XM_059883019.1 → XP_059739002.1  guanine nucleotide exchange factor for Rab-3A isoform X8

    UniProtKB/TrEMBL
    A0A3Q1LGV1

  10. XM_059883015.1 → XP_059738998.1  guanine nucleotide exchange factor for Rab-3A isoform X3

  11. XM_024987309.2 → XP_024843077.1  guanine nucleotide exchange factor for Rab-3A isoform X7

    UniProtKB/TrEMBL
    A0A3Q1LGV1
    Conserved Domains (2) summary
    pfam05262
    Location:46 → 159
    Borrelia_P83; Borrelia P83/100 protein
    pfam06428
    Location:115 → 159
    Sec2p; GDP/GTP exchange factor Sec2p

  12. XM_059883014.1 → XP_059738997.1  guanine nucleotide exchange factor for Rab-3A isoform X2

  13. XM_059883013.1 → XP_059738996.1  guanine nucleotide exchange factor for Rab-3A isoform X1

  14. XM_059883022.1 → XP_059739005.1  guanine nucleotide exchange factor for Rab-3A isoform X12

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KJ58.1 GenPept UniProtKB/Swiss-Prot:Q2KJ58

Gene LinkOut

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