U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HOMEZ homeobox and leucine zipper encoding [ Bos taurus (domestic cattle) ]

Gene ID: 614181, updated on 30-Jan-2025
Official Symbol
HOMEZprovided by VGNC
Official Full Name
homeobox and leucine zipper encodingprovided by VGNC
Primary source
VGNC:VGNC:29904
See related
BGD:BT21959; EnsemblRapid:ENSBTAG00070033190
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See HOMEZ in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (21616559..21628635)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene poly(A) binding protein nuclear 1 Neighboring gene BCL2 like 2 Neighboring gene protein phosphatase 1 regulatory subunit 3E Neighboring gene ring finger protein 212B Neighboring gene solute carrier family 7 member 8 Neighboring gene U6 spliceosomal RNA

Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
homeobox and leucine zipper protein Homez

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    21616559..21628635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024997944.2 → XP_024853712.1  homeobox and leucine zipper protein Homez isoform X2

    Conserved Domains (3) summary
    cd00086
    Location:352 → 409
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:456 → 502
    Homez; Homeodomain leucine-zipper encoding, Homez
    cl27820
    Location:298 → 443
    Abdominal-A; Homeobox protein

  2. XM_002690504.6 → XP_002690550.3  homeobox and leucine zipper protein Homez isoform X1

    See identical proteins and their annotated locations for XP_002690550.3

    Conserved Domains (3) summary
    COG5576
    Location:296 → 441
    COG5576; Homeodomain-containing transcription factor [Transcription]
    cd00086
    Location:350 → 407
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:454 → 500
    Homez; Homeodomain leucine-zipper encoding, Homez

  3. XM_059890781.1 → XP_059746764.1  homeobox and leucine zipper protein Homez isoform X3

    UniProtKB/TrEMBL
    F6PXY2
    Related
    ENSBTAP00070045655.1, ENSBTAT00070074938.1

  4. XM_024997946.2 → XP_024853714.1  homeobox and leucine zipper protein Homez isoform X3

    UniProtKB/TrEMBL
    F6PXY2
    Related
    ENSBTAP00070045705.1, ENSBTAT00070074998.1
    Conserved Domains (3) summary
    cd00086
    Location:326 → 383
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:430 → 476
    Homez; Homeodomain leucine-zipper encoding, Homez
    cl27820
    Location:272 → 417
    Abdominal-A; Homeobox protein

  5. XM_059890782.1 → XP_059746765.1  homeobox and leucine zipper protein Homez isoform X3

    UniProtKB/TrEMBL
    F6PXY2

  6. XM_059890783.1 → XP_059746766.1  homeobox and leucine zipper protein Homez isoform X3

    UniProtKB/TrEMBL
    F6PXY2
    Related
    ENSBTAP00070045687.1, ENSBTAT00070074975.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials