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tbx3 T-box 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 613116, updated on 20-Jun-2018

Summary

Official Symbol
tbx3provided by Xenbase
Official Full Name
T-box 3provided by Xenbase
Primary source
Xenbase:XB-GENE-1018231
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
et; ums; xhl; xtbx3; Xltbx3; tbx3-a; tbx3-b; tbx3-iso
Orthologs

Genomic context

See tbx3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (133313766..133324195)
102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668232.1 (62132375..62142804, complement)

Chromosome 1 - NC_030677.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 119 Neighboring gene mediator complex subunit 13-like Neighboring gene actin, alpha sarcomeric/cardiac Neighboring gene uncharacterized LOC108645063 Neighboring gene T-box 5 Neighboring gene RNA binding motif protein 19

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
T-box transcription factor TBX3
Names
T-box 3 (ulnar mammary syndrome)

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001032353.1NP_001027524.1  T-box transcription factor TBX3

    See identical proteins and their annotated locations for NP_001027524.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099621
    UniProtKB/TrEMBL
    Q4KKX3
    Conserved Domains (2) summary
    pfam00907
    Location:106286
    T-box; T-box
    pfam12598
    Location:304384
    TBX; T-box transcription factor

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_tropicalis_v9.1 Primary Assembly

Genomic

  1. NC_030677.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Range
    133313766..133324195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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