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CCDC87 coiled-coil domain containing 87 [ Canis lupus familiaris (dog) ]

Gene ID: 611893, updated on 5-Mar-2024

Summary

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Official Symbol
CCDC87provided by VGNC
Official Full Name
coiled-coil domain containing 87provided by VGNC
Primary source
VGNC:VGNC:38866
See related
Ensembl:ENSCAFG00845012639
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (51790913..51793730)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (49368112..49370929)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (51261982..51264800)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (50892297..50895114)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (50472130..50474948)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 4B Neighboring gene RNA binding motif protein 14 Neighboring gene uncharacterized LOC106559991 Neighboring gene copper chaperone for superoxide dismutase Neighboring gene cathepsin F Neighboring gene actinin alpha 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 87

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    51790913..51793730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038424875.1 → XP_038280803.1  coiled-coil domain-containing protein 87

    UniProtKB/TrEMBL
    A0A8C0SL35, A0A8I3NLZ3
    Related
    ENSCAFP00845017662.1, ENSCAFT00845022492.1
    Conserved Domains (1) summary
    pfam03999
    Location:663 → 862
    MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    50892297..50895114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501116.1 → XP_038357044.1  coiled-coil domain-containing protein 87

    Conserved Domains (1) summary
    pfam03999
    Location:663 → 862
    MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    50472130..50474948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038627937.1 → XP_038483865.1  coiled-coil domain-containing protein 87

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    51261982..51264800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038563815.1 → XP_038419743.1  coiled-coil domain-containing protein 87

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    49368112..49370929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_849617.5 → XP_854710.1  coiled-coil domain-containing protein 87

    UniProtKB/TrEMBL
    A0A8P0NPS3
    Conserved Domains (1) summary
    pfam03999
    Location:663 → 862
    MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)
Nucleotide Protein
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