U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LIN52 lin-52 DREAM MuvB core complex component [ Canis lupus familiaris (dog) ]

Gene ID: 611889, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
LIN52provided by VGNC
Official Full Name
lin-52 DREAM MuvB core complex componentprovided by VGNC
Primary source
VGNC:VGNC:50543
See related
Ensembl:ENSCAFG00845014059
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (47532122..47643342)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (46988724..47100072)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (47609926..47721310)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (47201341..47312653)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (47219087..47334674)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5 (inactive) Neighboring gene basal body orientation factor 1 Neighboring gene U4 spliceosomal RNA Neighboring gene aldehyde dehydrogenase 6 family member A1 Neighboring gene uncharacterized LOC119873002 Neighboring gene visual system homeobox 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DRM complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein lin-52 homolog
Names
lin-52 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    47532122..47643342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674182.1 → XP_038530110.1  protein lin-52 homolog isoform X7

    Conserved Domains (1) summary
    pfam10044
    Location:18 → 98
    LIN52; Retinal tissue protein

  2. XM_038674176.1 → XP_038530104.1  protein lin-52 homolog isoform X2

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  3. XM_038674177.1 → XP_038530105.1  protein lin-52 homolog isoform X3

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  4. XM_038674180.1 → XP_038530108.1  protein lin-52 homolog isoform X1

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 95
    LIN52; Retinal tissue protein

  5. XM_038674179.1 → XP_038530107.1  protein lin-52 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8C0JQ30, A0A8P0PIU8
    Related
    ENSCAFP00845019797.1, ENSCAFT00845025175.1
    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  6. XM_038674181.1 → XP_038530109.1  protein lin-52 homolog isoform X6

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  7. XM_038674178.1 → XP_038530106.1  protein lin-52 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0JQ30, A0A8I3S0L0
    Related
    ENSCAFP00845019807.1, ENSCAFT00845025189.1
    Conserved Domains (1) summary
    pfam10044
    Location:13 → 106
    LIN52; Retinal tissue protein

RNA

  1. XR_005431223.1 RNA Sequence

  2. XR_005431224.1 RNA Sequence

  3. XR_005431225.1 RNA Sequence

  4. XR_005431226.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    47201341..47312653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483780.1 → XP_038339708.1  protein lin-52 homolog isoform X7

    Conserved Domains (1) summary
    pfam10044
    Location:18 → 98
    LIN52; Retinal tissue protein

  2. XM_038483774.1 → XP_038339702.1  protein lin-52 homolog isoform X2

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  3. XM_038483775.1 → XP_038339703.1  protein lin-52 homolog isoform X3

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  4. XM_038483778.1 → XP_038339706.1  protein lin-52 homolog isoform X1

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 95
    LIN52; Retinal tissue protein

  5. XM_038483777.1 → XP_038339705.1  protein lin-52 homolog isoform X5

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  6. XM_038483779.1 → XP_038339707.1  protein lin-52 homolog isoform X6

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  7. XM_038483776.1 → XP_038339704.1  protein lin-52 homolog isoform X4

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 106
    LIN52; Retinal tissue protein

RNA

  1. XR_005329666.1 RNA Sequence

  2. XR_005329667.1 RNA Sequence

  3. XR_005329668.1 RNA Sequence

  4. XR_005329669.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    47219087..47334674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609356.1 → XP_038465284.1  protein lin-52 homolog isoform X7

    Conserved Domains (1) summary
    pfam10044
    Location:18 → 98
    LIN52; Retinal tissue protein

  2. XM_038609350.1 → XP_038465278.1  protein lin-52 homolog isoform X2

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  3. XM_038609351.1 → XP_038465279.1  protein lin-52 homolog isoform X3

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  4. XM_038609354.1 → XP_038465282.1  protein lin-52 homolog isoform X5

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  5. XM_038609355.1 → XP_038465283.1  protein lin-52 homolog isoform X6

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  6. XM_038609352.1 → XP_038465280.1  protein lin-52 homolog isoform X4

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 106
    LIN52; Retinal tissue protein

RNA

  1. XR_005397978.1 RNA Sequence

  2. XR_005397979.1 RNA Sequence

  3. XR_005397980.1 RNA Sequence

  4. XR_005397981.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    47609926..47721310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545260.1 → XP_038401188.1  protein lin-52 homolog isoform X7

    Conserved Domains (1) summary
    pfam10044
    Location:18 → 98
    LIN52; Retinal tissue protein

  2. XM_038545254.1 → XP_038401182.1  protein lin-52 homolog isoform X2

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  3. XM_038545255.1 → XP_038401183.1  protein lin-52 homolog isoform X3

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  4. XM_038545258.1 → XP_038401186.1  protein lin-52 homolog isoform X1

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 95
    LIN52; Retinal tissue protein

  5. XM_038545257.1 → XP_038401185.1  protein lin-52 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8C0JQ30, A0A8P0PIU8
    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  6. XM_038545259.1 → XP_038401187.1  protein lin-52 homolog isoform X6

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  7. XM_038545256.1 → XP_038401184.1  protein lin-52 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0JQ30, A0A8I3S0L0
    Conserved Domains (1) summary
    pfam10044
    Location:13 → 106
    LIN52; Retinal tissue protein

RNA

  1. XR_005363523.1 RNA Sequence

  2. XR_005363524.1 RNA Sequence

  3. XR_005363525.1 RNA Sequence

  4. XR_005363526.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    46988724..47100072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038591141.1 → XP_038447069.1  protein lin-52 homolog isoform X7

    Conserved Domains (1) summary
    pfam10044
    Location:18 → 98
    LIN52; Retinal tissue protein

  2. XM_038591069.1 → XP_038446997.1  protein lin-52 homolog isoform X2

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  3. XM_038591078.1 → XP_038447006.1  protein lin-52 homolog isoform X3

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  4. XM_038591113.1 → XP_038447041.1  protein lin-52 homolog isoform X1

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 95
    LIN52; Retinal tissue protein

  5. XM_038591104.1 → XP_038447032.1  protein lin-52 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8C0JQ30, A0A8P0PIU8
    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  6. XM_038591133.1 → XP_038447061.1  protein lin-52 homolog isoform X6

    Conserved Domains (1) summary
    pfam10044
    Location:13 → 93
    LIN52; Retinal tissue protein

  7. XM_038591088.1 → XP_038447016.1  protein lin-52 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0JQ30, A0A8I3S0L0
    Conserved Domains (1) summary
    pfam10044
    Location:13 → 106
    LIN52; Retinal tissue protein

RNA

  1. XR_005388497.1 RNA Sequence

  2. XR_005388501.1 RNA Sequence

  3. XR_005388504.1 RNA Sequence

  4. XR_005388506.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous