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ATN1 atrophin 1 [ Canis lupus familiaris (dog) ]

Gene ID: 611607, updated on 27-Jun-2026
Official Symbol
ATN1provided by VGNC
Official Full Name
atrophin 1provided by VGNC
Primary source
VGNC:VGNC:38234
See related
Ensembl:ENSCAFG00845026413 RGD:12148835
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See ATN1 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (38457244..38471505, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (8497826..8512450)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (7976546..7990812)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (38331302..38345906, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (38372276..38386882, complement)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 6 Neighboring gene chromosome 27 C12orf57 homolog Neighboring gene uncharacterized LOC111092761 Neighboring gene U7 small nuclear RNA Neighboring gene enolase 2 Neighboring gene leucine rich repeat containing 23 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
atrophin-1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    38457244..38471505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439131.1 → XP_038295059.1  atrophin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JQQ8, A0A8I3S5W0
    Related
    ENSCAFP00845036553.1, ENSCAFT00845046560.1
    Conserved Domains (1) summary
    pfam03154
    Location:1 → 1204
    Atrophin-1; Atrophin-1 family

  2. XM_038439129.1 → XP_038295057.1  atrophin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JQQ8
    Conserved Domains (1) summary
    pfam03154
    Location:1 → 1203
    Atrophin-1; Atrophin-1 family

  3. XM_038439132.1 → XP_038295060.1  atrophin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JQQ8
    Conserved Domains (1) summary
    pfam03154
    Location:1 → 1203
    Atrophin-1; Atrophin-1 family

  4. XM_038439130.1 → XP_038295058.1  atrophin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JQQ8, A0A8I3S5W0
    Conserved Domains (1) summary
    pfam03154
    Location:1 → 1204
    Atrophin-1; Atrophin-1 family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    38331302..38345906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513798.1 → XP_038369726.1  

  2. XM_038513796.1 → XP_038369724.1  

  3. XM_038513795.1 → XP_038369723.1  

  4. XM_038513797.1 → XP_038369725.1  

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    38372276..38386882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641639.1 → XP_038497567.1  

  2. XM_038641637.1 → XP_038497565.1  

  3. XM_038641636.1 → XP_038497564.1  

  4. XM_038641638.1 → XP_038497566.1  

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    7976546..7990812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576629.1 → XP_038432557.1  atrophin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JQQ8

  2. XM_038576627.1 → XP_038432555.1  atrophin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JQQ8

  3. XM_038576630.1 → XP_038432558.1  atrophin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JQQ8

  4. XM_038576628.1 → XP_038432556.1  atrophin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JQQ8

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    8497826..8512450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022411579.2 → XP_022267287.2  atrophin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JQQ8
    Conserved Domains (1) summary
    pfam03154
    Location:1 → 1201
    Atrophin-1; Atrophin-1 family

  2. XM_038459759.1 → XP_038315687.1  atrophin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JQQ8
    Conserved Domains (1) summary
    pfam03154
    Location:1 → 1200
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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