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CLRN2 clarin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 610779, updated on 27-Jun-2026
Official Symbol
CLRN2provided by VGNC
Official Full Name
clarin 2provided by VGNC
Primary source
VGNC:VGNC:39360
See related
Ensembl:ENSCAFG00845000538 RGD:12073722
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See CLRN2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (63434070..63442746, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (65475071..65483728, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (63488676..63497337, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (62925039..62933914, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (63129190..63137869, complement)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095258 Neighboring gene mediator complex subunit 28 Neighboring gene leucine aminopeptidase 3 Neighboring gene quinoid dihydropteridine reductase Neighboring gene actin, cytoplasmic 2 pseudogene

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
clarin-2

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    63434070..63442746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660558.1 → XP_038516486.1  clarin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KHG3, A0A8I3MI40
    Related
    ENSCAFP00845000655.1, ENSCAFT00845000869.1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    62925039..62933914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038471186.1 → XP_038327114.1  

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    63129190..63137869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038596362.1 → XP_038452290.1  

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    63488676..63497337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038532106.1 → XP_038388034.1  clarin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KHG3, A0A8I3MI40

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    65475071..65483728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_848330.5 → XP_853423.1  clarin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KHG3, A0A8I3MI40
Nucleotide Protein
Heading Accession and Version

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