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IGSF5 immunoglobulin superfamily member 5 [ Canis lupus familiaris (dog) ]

Gene ID: 610716, updated on 1-Mar-2025
Official Symbol
IGSF5provided by VGNC
Official Full Name
immunoglobulin superfamily member 5provided by VGNC
Primary source
VGNC:VGNC:53028
See related
Ensembl:ENSCAFG00845029797 RGD:12052242
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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See IGSF5 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (33951242..33995344)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (33716206..33760110)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (34319272..34363166)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (33822278..33864850)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (33827115..33870991)

Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene SH3 domain-binding glutamic acid-rich protein-like Neighboring gene uncharacterized LOC111093482 Neighboring gene beta-1,3-galactosyltransferase 5 Neighboring gene Purkinje cell protein 4 Neighboring gene uncharacterized LOC119867024

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Ligand-of-Numb protein X is an endocytic scaffold for junctional adhesion molecule 4. Kansaku A, et al. Oncogene, 2006 Aug 24. PMID 16832352
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
immunoglobulin superfamily member 5

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051835.1 Reference ROS_Cfam_1.0

    Range
    33951242..33995344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038443549.1 → XP_038299477.1  immunoglobulin superfamily member 5 isoform X2

    Conserved Domains (2) summary
    cd00096
    Location:29 → 35
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  2. XM_038443550.1 → XP_038299478.1  immunoglobulin superfamily member 5 isoform X3

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  3. XM_038443548.1 → XP_038299476.1  immunoglobulin superfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0TPQ2, A0A8I3Q4K8
    Related
    ENSCAFP00845041430.1, ENSCAFT00845052771.1
    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  4. XM_038443547.1 → XP_038299475.1  immunoglobulin superfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0TPQ2, A0A8I3Q4K8
    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049291.1 Alternate UMICH_Zoey_3.1

    Range
    33822278..33864850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038517957.1 → XP_038373885.1  immunoglobulin superfamily member 5 isoform X1

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  2. XM_038517958.1 → XP_038373886.1  immunoglobulin superfamily member 5 isoform X2

    Conserved Domains (2) summary
    cd00096
    Location:29 → 35
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  3. XM_038517959.1 → XP_038373887.1  immunoglobulin superfamily member 5 isoform X3

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

    Range
    33827115..33870991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038645911.1 → XP_038501839.1  immunoglobulin superfamily member 5 isoform X2

    Conserved Domains (2) summary
    cd00096
    Location:29 → 35
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  2. XM_038645912.1 → XP_038501840.1  immunoglobulin superfamily member 5 isoform X3

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  3. XM_038645910.1 → XP_038501838.1  immunoglobulin superfamily member 5 isoform X1

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  4. XM_038645909.1 → XP_038501837.1  immunoglobulin superfamily member 5 isoform X1

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

    Range
    34319272..34363166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038581528.1 → XP_038437456.1  immunoglobulin superfamily member 5 isoform X2

    Conserved Domains (2) summary
    cd00096
    Location:29 → 35
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  2. XM_038581529.1 → XP_038437457.1  immunoglobulin superfamily member 5 isoform X3

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  3. XM_038581527.1 → XP_038437455.1  immunoglobulin superfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0TPQ2, A0A8I3Q4K8
    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  4. XM_038581526.1 → XP_038437454.1  immunoglobulin superfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0TPQ2, A0A8I3Q4K8
    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    33716206..33760110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005638920.4 → XP_005638977.1  immunoglobulin superfamily member 5 isoform X2

    Conserved Domains (2) summary
    cd00096
    Location:29 → 35
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  2. XM_022413232.2 → XP_022268940.1  immunoglobulin superfamily member 5 isoform X3

    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  3. XM_005638917.4 → XP_005638974.1  immunoglobulin superfamily member 5 isoform X1

    See identical proteins and their annotated locations for XP_005638974.1

    UniProtKB/TrEMBL
    A0A8C0TPQ2, A0A8I3Q4K8
    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain

  4. XM_005638916.4 → XP_005638973.1  immunoglobulin superfamily member 5 isoform X1

    See identical proteins and their annotated locations for XP_005638973.1

    UniProtKB/TrEMBL
    A0A8C0TPQ2, A0A8I3Q4K8
    Conserved Domains (2) summary
    cd00096
    Location:31 → 36
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:26 → 124
    Ig; Immunoglobulin domain
Nucleotide Protein
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