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LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 [ Canis lupus familiaris (dog) ]

Gene ID: 610534, updated on 1-Mar-2025
Official Symbol
LRIT3provided by VGNC
Official Full Name
leucine rich repeat, Ig-like and transmembrane domains 3provided by VGNC
Primary source
VGNC:VGNC:42770
See related
Ensembl:ENSCAFG00845030077 RGD:12117370
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See LRIT3 in Genome Data Viewer
Location:
chromosome: 32
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 32 NC_051836.1 (30245558..30265027)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 32 NC_006614.4 (11985138..12005245, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 32 NC_049253.1 (9846854..9866284, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 32 NC_049292.1 (30239814..30259071)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 32 NC_049773.1 (29982829..30002291)

Chromosome 32 - NC_051836.1Genomic Context describing neighboring genes Neighboring gene complement factor I Neighboring gene uncharacterized LOC119867202 Neighboring gene GAR1 ribonucleoprotein Neighboring gene retinal pigment epithelium-derived rhodopsin homolog Neighboring gene 40S ribosomal protein S27-like Neighboring gene U2 spliceosomal RNA Neighboring gene epidermal growth factor Neighboring gene uncharacterized LOC111093671

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051836.1 Reference ROS_Cfam_1.0

    Range
    30245558..30265027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038444374.1 → XP_038300302.1  leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0TP47, A0A8I3Q8F8
    Related
    ENSCAFP00845041857.1, ENSCAFT00845053293.1
    Conserved Domains (5) summary
    smart00060
    Location:489 → 555
    FN3; Fibronectin type 3 domain
    sd00031
    Location:60 → 83
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:130 → 191
    LRR_8; Leucine rich repeat
    pfam13927
    Location:254 → 333
    Ig_3; Immunoglobulin domain
    cd00096
    Location:270 → 279
    Ig; Ig strand B [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049292.1 Alternate UMICH_Zoey_3.1

    Range
    30239814..30259071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038518761.1 → XP_038374689.1  leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049773.1 Alternate UNSW_CanFamBas_1.0

    Range
    29982829..30002291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038646709.1 → XP_038502637.1  leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 isoform X1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049253.1 Alternate UU_Cfam_GSD_1.0

    Range
    9846854..9866284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038581903.1 → XP_038437831.1  leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P740, A0A8C0R1K9, A0A8C0TP47

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006614.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    11985138..12005245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_848057.6 → XP_853150.3  leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0TP47, A0A8P0NDF6
    Conserved Domains (6) summary
    smart00060
    Location:489 → 555
    FN3; Fibronectin type 3 domain
    smart00410
    Location:263 → 340
    IG_like; Immunoglobulin like
    sd00031
    Location:60 → 83
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:130 → 171
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:130 → 191
    LRR_8; Leucine rich repeat
    cl11960
    Location:266 → 336
    Ig; Immunoglobulin domain
Nucleotide Protein
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