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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051842.1 Reference ROS_Cfam_1.0
- Range
-
22889144..22921377 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038448725.1 → XP_038304653.1 cell adhesion molecule 3 isoform X2
- UniProtKB/TrEMBL
- A0A8C0L5D1, A0A8I3NU39
- Related
- ENSCAFP00845021754.1, ENSCAFT00845027643.1
- Conserved Domains (5) summary
-
- smart00294
Location:353 → 368
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:31 → 125
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00410
Location:244 → 315
- IG_like; Immunoglobulin like
- cd00096
Location:126 → 129
- Ig; Ig strand A [structural motif]
- cl11960
Location:126 → 228
- Ig; Immunoglobulin domain
-
XM_038448723.1 → XP_038304651.1 cell adhesion molecule 3 isoform X1
- UniProtKB/TrEMBL
- A0A8C0L650, A0A8I3P094
- Related
- ENSCAFP00845021734.1, ENSCAFT00845027620.1
- Conserved Domains (5) summary
-
- smart00294
Location:387 → 402
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:65 → 159
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:278 → 349
- IG; Immunoglobulin
- cd00096
Location:160 → 163
- Ig; Ig strand A [structural motif]
- cl11960
Location:160 → 262
- Ig; Immunoglobulin domain
-
XM_038448724.1 → XP_038304652.1 cell adhesion molecule 3 isoform X3
- UniProtKB/TrEMBL
- A0A8I3NXI6, A0A8I3RYV8
- Related
- ENSCAFP00845021793.1, ENSCAFT00845027693.1
- Conserved Domains (5) summary
-
- smart00294
Location:365 → 380
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:43 → 137
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:256 → 327
- IG; Immunoglobulin
- cd00096
Location:138 → 141
- Ig; Ig strand A [structural motif]
- cl11960
Location:138 → 240
- Ig; Immunoglobulin domain
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049298.1 Alternate UMICH_Zoey_3.1
- Range
-
22653815..22685167 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038522591.1 → XP_038378519.1
-
XM_038522590.1 → XP_038378518.1
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049779.1 Alternate UNSW_CanFamBas_1.0
- Range
-
23188986..23220281 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038650810.1 → XP_038506738.1
-
XM_038650809.1 → XP_038506737.1
- Conserved Domains (5) summary
-
- smart00294
Location:365 → 380
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:43 → 137
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:256 → 327
- IG; Immunoglobulin
- cd00096
Location:138 → 141
- Ig; Ig strand A [structural motif]
- cl11960
Location:138 → 240
- Ig; Immunoglobulin domain
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049259.1 Alternate UU_Cfam_GSD_1.0
- Range
-
23619494..23650802 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038586390.1 → XP_038442318.1 cell adhesion molecule 3 isoform X2
- UniProtKB/TrEMBL
- A0A8C0L5D1, A0A8I3NU39
- Conserved Domains (5) summary
-
- smart00294
Location:353 → 368
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:31 → 125
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00410
Location:244 → 315
- IG_like; Immunoglobulin like
- cd00096
Location:126 → 129
- Ig; Ig strand A [structural motif]
- cl11960
Location:126 → 228
- Ig; Immunoglobulin domain
-
XM_038586388.1 → XP_038442316.1 cell adhesion molecule 3 isoform X1
- UniProtKB/TrEMBL
- A0A8C0L650, A0A8I3P094
- Conserved Domains (5) summary
-
- smart00294
Location:387 → 402
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:65 → 159
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:278 → 349
- IG; Immunoglobulin
- cd00096
Location:160 → 163
- Ig; Ig strand A [structural motif]
- cl11960
Location:160 → 262
- Ig; Immunoglobulin domain
-
XM_038586389.1 → XP_038442317.1 cell adhesion molecule 3 isoform X3
- UniProtKB/TrEMBL
- A0A8I3NXI6, A0A8I3RYV8
- Conserved Domains (5) summary
-
- smart00294
Location:365 → 380
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:43 → 137
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:256 → 327
- IG; Immunoglobulin
- cd00096
Location:138 → 141
- Ig; Ig strand A [structural motif]
- cl11960
Location:138 → 240
- Ig; Immunoglobulin domain
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006620.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
22778427..22809646 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038464047.1 → XP_038319975.1 cell adhesion molecule 3 isoform X2
- UniProtKB/TrEMBL
- A0A8C0L5D1, A0A8I3NU39
- Conserved Domains (5) summary
-
- smart00294
Location:353 → 368
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:31 → 125
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00410
Location:244 → 315
- IG_like; Immunoglobulin like
- cd00096
Location:126 → 129
- Ig; Ig strand A [structural motif]
- cl11960
Location:126 → 228
- Ig; Immunoglobulin domain
-
XM_038464046.1 → XP_038319974.1 cell adhesion molecule 3 isoform X1
- UniProtKB/TrEMBL
- A0A8C0L650, A0A8I3P094
- Conserved Domains (5) summary
-
- smart00294
Location:387 → 402
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:65 → 159
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:278 → 349
- IG; Immunoglobulin
- cd00096
Location:160 → 163
- Ig; Ig strand A [structural motif]
- cl11960
Location:160 → 262
- Ig; Immunoglobulin domain
-
XM_014111257.2 → XP_013966732.1 cell adhesion molecule 3 isoform X3
- UniProtKB/TrEMBL
- A0A8I3NXI6, A0A8I3RYV8
- Conserved Domains (5) summary
-
- smart00294
Location:365 → 380
- 4.1m; putative band 4.1 homologues' binding motif
- cd05882
Location:43 → 137
- IgV_1_Necl-1; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-1 (Necl-1); member of the V-set of Ig superfamily (IgSF) domains
- smart00409
Location:256 → 327
- IG; Immunoglobulin
- cd00096
Location:138 → 141
- Ig; Ig strand A [structural motif]
- cl11960
Location:138 → 240
- Ig; Immunoglobulin domain