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HPCAL1 hippocalcin like 1 [ Canis lupus familiaris (dog) ]

Gene ID: 609787, updated on 27-Jun-2026
Official Symbol
HPCAL1provided by VGNC
Official Full Name
hippocalcin like 1provided by VGNC
Primary source
VGNC:VGNC:41768
See related
Ensembl:ENSCAFG00845026130 RGD:12394987
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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Try the new Transcripts and proteins table
See HPCAL1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (7345257..7457756)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (7173332..7285510)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (7252795..7364956)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (7236279..7348259)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (7238577..7350841)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-8846 Neighboring gene uncharacterized LOC119869740 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene uncharacterized LOC111090485 Neighboring gene ornithine decarboxylase 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
hippocalcin-like protein 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    7345257..7457756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690704.1 → XP_038546632.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    A0A8C0LQA4, A0A8I3MZQ6, A0A8I3PSJ2
    Related
    ENSCAFP00845036200.1, ENSCAFT00845046102.1
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    7236279..7348259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038498230.1 → XP_038354158.1  

    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    7238577..7350841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038624795.1 → XP_038480723.1  

    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    7252795..7364956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038560767.1 → XP_038416695.1  hippocalcin-like protein 1

    UniProtKB/TrEMBL
    A0A8C0LQA4, A0A8I3MZQ6, A0A8I3PSJ2
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7173332..7285510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_847124.4 → XP_852217.2  hippocalcin-like protein 1

    See identical proteins and their annotated locations for XP_852217.2

    UniProtKB/TrEMBL
    A0A8C0LQA4, A0A8I3MZQ6, A0A8I3PSJ2
    Conserved Domains (1) summary
    COG5126
    Location:13 → 179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
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