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NR6A1 nuclear receptor subfamily 6 group A member 1 [ Canis lupus familiaris (dog) ]

Gene ID: 609642, updated on 17-Aug-2024

Summary

Official Symbol
NR6A1provided by VGNC
Official Full Name
nuclear receptor subfamily 6 group A member 1provided by VGNC
Primary source
VGNC:VGNC:49827
See related
Ensembl:ENSCAFG00845010445
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
Sf1
Orthologs
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Genomic context

See NR6A1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (59147688..59369600)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (57426017..57647543)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (58313376..58535253)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (57906617..58128464)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (58222497..58444747)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene olfactomedin like 2A Neighboring gene uncharacterized LOC102152471 Neighboring gene microRNA mir-181b-2 Neighboring gene microRNA mir-181a-2 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC102151918 Neighboring gene nuclear receptor subfamily 5 group A member 1

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
nuclear receptor subfamily 6 group A member 1
Names
steroidogenic factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    59147688..59369600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038678621.1XP_038534549.1  nuclear receptor subfamily 6 group A member 1

    UniProtKB/TrEMBL
    A0A8C0KUK4
    Related
    ENSCAFP00845014372.1, ENSCAFT00845018409.1
    Conserved Domains (2) summary
    cd06953
    Location:253464
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:50139
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    57906617..58128464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038487452.1XP_038343380.1  nuclear receptor subfamily 6 group A member 1

    Conserved Domains (2) summary
    cd06953
    Location:253464
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:50139
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    58222497..58444747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038613329.1XP_038469257.1  nuclear receptor subfamily 6 group A member 1

    Conserved Domains (2) summary
    cd06953
    Location:253464
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:50139
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    58313376..58535253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038549389.1XP_038405317.1  nuclear receptor subfamily 6 group A member 1

    UniProtKB/TrEMBL
    A0A8C0KUK4
    Conserved Domains (2) summary
    cd06953
    Location:253464
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:50139
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    57426017..57647543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620149.1XP_038476077.1  nuclear receptor subfamily 6 group A member 1

    UniProtKB/TrEMBL
    A0A8C0KUK4
    Conserved Domains (2) summary
    cd06953
    Location:253464
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cd07169
    Location:50139
    NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers