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SGCA sarcoglycan alpha [ Canis lupus familiaris (dog) ]

Gene ID: 609265, updated on 7-Oct-2019

Summary

Official Symbol
SGCAprovided by VGNC
Official Full Name
sarcoglycan alphaprovided by VGNC
Primary source
VGNC:VGNC:46091
See related
Ensembl:ENSCAFG00000017013
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See SGCA in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 9 NC_006591.3 (26164784..26178249)

Chromosome 9 - NC_006591.3Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 14 Neighboring gene uncharacterized LOC111097376 Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene uncharacterized LOC106559295 Neighboring gene collagen type I alpha 1 chain Neighboring gene transmembrane protein 92

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006591.3 Chromosome 9 Reference CanFam3.1 Primary Assembly

Pathways from BioSystems

  • Arrhythmogenic right ventricular cardiomyopathy (ARVC), organism-specific biosystem (from KEGG)
    Arrhythmogenic right ventricular cardiomyopathy (ARVC), organism-specific biosystemArrhythmogenic right ventricular cardiomyopathy (ARVC) is an inherited heart muscle disease that may result in arrhythmia, heart failure, and sudden death. The hallmark pathological findings are prog...
  • Arrhythmogenic right ventricular cardiomyopathy (ARVC), conserved biosystem (from KEGG)
    Arrhythmogenic right ventricular cardiomyopathy (ARVC), conserved biosystemArrhythmogenic right ventricular cardiomyopathy (ARVC) is an inherited heart muscle disease that may result in arrhythmia, heart failure, and sudden death. The hallmark pathological findings are prog...
  • Dilated cardiomyopathy, organism-specific biosystem (from KEGG)
    Dilated cardiomyopathy, organism-specific biosystemDilated cardiomyopathy (DCM) is a heart muscle disease characterised by dilation and impaired contraction of the left or both ventricles that results in progressive heart failure and sudden cardiac d...
  • Dilated cardiomyopathy, conserved biosystem (from KEGG)
    Dilated cardiomyopathy, conserved biosystemDilated cardiomyopathy (DCM) is a heart muscle disease characterised by dilation and impaired contraction of the left or both ventricles that results in progressive heart failure and sudden cardiac d...
  • Hypertrophic cardiomyopathy (HCM), organism-specific biosystem (from KEGG)
    Hypertrophic cardiomyopathy (HCM), organism-specific biosystemHypertrophic cardiomyopathy (HCM) is a primary myocardial disorder with an autosomal dominant pattern of inheritance that is characterized by hypertrophy of the left ventricles with histological feat...
  • Hypertrophic cardiomyopathy (HCM), conserved biosystem (from KEGG)
    Hypertrophic cardiomyopathy (HCM), conserved biosystemHypertrophic cardiomyopathy (HCM) is a primary myocardial disorder with an autosomal dominant pattern of inheritance that is characterized by hypertrophy of the left ventricles with histological feat...
  • Viral myocarditis, organism-specific biosystem (from KEGG)
    Viral myocarditis, organism-specific biosystemMyocarditis is a cardiac disease associated with inflammation and injury of the myocardium. It results from various etiologies, both noninfectious and infectious, but coxsackievirus B3 (CVB3) is stil...

General gene information

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006591.3 Reference CanFam3.1 Primary Assembly

    Range
    26164784..26178249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005624636.3XP_005624693.1  alpha-sarcoglycan

    See identical proteins and their annotated locations for XP_005624693.1

    Conserved Domains (1) summary
    pfam05510
    Location:8350
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
  2. XM_005624635.2XP_005624692.1  alpha-sarcoglycan

    See identical proteins and their annotated locations for XP_005624692.1

    Related
    ENSCAFP00000056556.1, ENSCAFT00000083627.1
    Conserved Domains (1) summary
    pfam05510
    Location:8350
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
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