U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RNY1 RNA, Ro60-associated Y1 [ Homo sapiens (human) ]

Gene ID: 6084, updated on 13-May-2022

Summary

Official Symbol
RNY1provided by HGNC
Official Full Name
RNA, Ro60-associated Y1provided by HGNC
Primary source
HGNC:HGNC:10242
See related
Ensembl:ENSG00000201098 MIM:601821; AllianceGenome:HGNC:10242
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Y1; HY1
Summary
Y RNAs are small noncoding RNAs that were originally identified as the RNA component of soluble ribonucleoproteins (RNPs) termed Ro RNPs. Ro RNPs are detected by autoimmune sera of patients suffering from rheumatic diseases, such as from systemic lupus erythematosus (MIM 152700) and Sjogren syndrome (MIM 270200). Ro RNPs consist of a Y RNA that is associated with the autoimmune antigen proteins Ro60 (TROVE2; MIM 600063) and La (SSB; MIM 109090), as well as other proteins. Four human Y RNAs have been identified: Y1, Y3 (RNY3; MIM 601822), Y4 (RNY4; MIM 601823), and Y5 (RNY5; MIM 601824). (Y2 is a truncated form of Y1.) Y RNAs are transcribed by RNA polymerase III and range in size from 83 to 112 nucleotides. They appear to have a functional role in chromosomal DNA replication (Christov et al., 2006 [PubMed 16943439]).[supplied by OMIM, Apr 2009]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See RNY1 in Genome Data Viewer
Location:
7q36.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (148987136..148987248, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (150169312..150169424, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (148684228..148684340, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901768 Neighboring gene RNA, Ro60-associated Y3 Neighboring gene gastric carcinoma proliferation enhancing transcript 1 Neighboring gene protein disulfide isomerase family A member 4

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • RNA, Ro-associated Y1
  • RNA, Y1 small cytoplasmic (associated with Ro protein)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_004391.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    V00584
    Related
    ENST00000364228.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    148987136..148987248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    150169312..150169424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)