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SQLE squalene epoxidase [ Canis lupus familiaris (dog) ]

Gene ID: 608021, updated on 4-Nov-2022

Summary

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Official Symbol
SQLEprovided by VGNC
Official Full Name
squalene epoxidaseprovided by VGNC
Primary source
VGNC:VGNC:46786
See related
Ensembl:ENSCAFG00845012036
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SQLE in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (23335721..23359940)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (22958181..22982327)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (23408709..23432884)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (23056318..23080692)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (23165695..23189887)
105 previous assembly CanFam3.1 (GCF_000002285.3) 13 NC_006595.3 (22994010..23018134)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102156610 Neighboring gene zinc finger protein 572 Neighboring gene WASH complex subunit 5 Neighboring gene NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase Neighboring gene uncharacterized LOC111098547

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
squalene monooxygenase
XP_005627990.1
XP_005627991.1
XP_038349159.1
XP_038349160.1
XP_038411425.1
XP_038411426.1
XP_038475324.1
XP_038475325.1
XP_038540932.1
XP_038540933.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    23335721..23359940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038685005.1 → XP_038540933.1  squalene monooxygenase

    UniProtKB/TrEMBL
    A0A8C0K1C6, A0A8C0MWQ3, A0A8I3NFI4
    Related
    ENSCAFP00845016852.1, ENSCAFT00845021443.1
    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_038685004.1 → XP_038540932.1  squalene monooxygenase

    UniProtKB/TrEMBL
    A0A8C0K1C6, A0A8C0MWQ3, A0A8I3NFI4
    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    23056318..23080692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493232.1 → XP_038349160.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_038493231.1 → XP_038349159.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    23165695..23189887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619397.1 → XP_038475325.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_038619396.1 → XP_038475324.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    23408709..23432884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555498.1 → XP_038411426.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_038555497.1 → XP_038411425.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    22958181..22982327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005627934.4 → XP_005627991.1  squalene monooxygenase

    See identical proteins and their annotated locations for XP_005627991.1

    UniProtKB/TrEMBL
    A0A8C0K1C6, A0A8C0MWQ3, A0A8I3NFI4, E2RHB9
    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_005627933.4 → XP_005627990.1  squalene monooxygenase

    See identical proteins and their annotated locations for XP_005627990.1

    UniProtKB/TrEMBL
    A0A8C0K1C6, A0A8C0MWQ3, A0A8I3NFI4, E2RHB9
    Conserved Domains (2) summary
    PRK07045
    Location:121 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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