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IRF9 interferon regulatory factor 9 [ Canis lupus familiaris (dog) ]

Gene ID: 607899, updated on 27-Jun-2026
Official Symbol
IRF9provided by VGNC
Official Full Name
interferon regulatory factor 9provided by VGNC
Primary source
VGNC:VGNC:42097
See related
Ensembl:ENSCAFG00845004714 RGD:12376481
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
ISGF3G
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See IRF9 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (4262726..4267771)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (4073839..4078885)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (4277257..4282303)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (3953354..3958397)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (4015093..4020132)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene proteasome activator subunit 2 Neighboring gene ring finger protein 31 Neighboring gene uncharacterized LOC111096970 Neighboring gene REC8 meiotic recombination protein Neighboring gene importin 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
interferon regulatory factor 9
Names
interferon-stimulated transcription factor 3, gamma 48kDa

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    4262726..4267771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038673213.1 → XP_038529141.1  interferon regulatory factor 9

    UniProtKB/TrEMBL
    A0A8I3MU00
    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

  2. XM_038673215.1 → XP_038529143.1  interferon regulatory factor 9

    UniProtKB/TrEMBL
    A0A8I3MU00
    Related
    ENSCAFP00845006685.1, ENSCAFT00845008481.1
    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    3953354..3958397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038482855.1 → XP_038338783.1  

    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

  2. XM_038482856.1 → XP_038338784.1  

    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    4015093..4020132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608406.1 → XP_038464334.1  

    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

  2. XM_038608407.1 → XP_038464335.1  

    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    4277257..4282303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544287.1 → XP_038400215.1  interferon regulatory factor 9

    UniProtKB/TrEMBL
    A0A8I3MU00
    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

  2. XM_038544288.1 → XP_038400216.1  interferon regulatory factor 9

    UniProtKB/TrEMBL
    A0A8I3MU00
    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    4073839..4078885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_855170.6 → XP_860263.1  interferon regulatory factor 9

    UniProtKB/TrEMBL
    A0A8I3MU00
    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3

  2. XM_038584028.1 → XP_038439956.1  interferon regulatory factor 9

    UniProtKB/TrEMBL
    A0A8I3MU00
    Conserved Domains (2) summary
    pfam00605
    Location:11 → 115
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:217 → 379
    IRF-3; Interferon-regulatory factor 3
Nucleotide Protein
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