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HCRT hypocretin neuropeptide precursor [ Canis lupus familiaris (dog) ]

Gene ID: 607641, updated on 10-Sep-2017
Official Symbol
HCRTprovided by VGNC
Official Full Name
hypocretin neuropeptide precursorprovided by VGNC
See related
Ensembl:ENSCAFG00000015615
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 9 NC_006591.3 (20729616..20732074)

Chromosome 9 - NC_006591.3Genomic Context describing neighboring genes Neighboring gene signal transducer and activator of transcription 5B Neighboring gene GH3 domain containing Neighboring gene potassium voltage-gated channel subfamily H member 4 Neighboring gene RAB5C, member RAS oncogene family

Genomic Sequence:
NC_006591.3 Chromosome 9 Reference CanFam3.1 Primary Assembly

Homology

Gene Ontology Provided by GO

Process Evidence Code Pubs
feeding behavior IEA
Inferred from Electronic Annotation
more info
 
neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell junction IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
synapse IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033994.1NP_001029166.1  orexin precursor

    See identical proteins and their annotated locations for NP_001029166.1

    Status: PROVISIONAL

    Source sequence(s)
    AF285110
    UniProtKB/Swiss-Prot
    Q9GLF6
    Conserved Domains (1) summary
    pfam02072
    Location:1129
    Orexin; Prepro-orexin

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006591.3 Reference CanFam3.1 Primary Assembly

    Range
    20729616..20732074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005624358.2XP_005624415.1  orexin isoform X1

    See identical proteins and their annotated locations for XP_005624415.1

    UniProtKB/Swiss-Prot
    Q9GLF6
    Related
    ENSCAFP00000022949.3, ENSCAFT00000024739.3
    Conserved Domains (1) summary
    pfam02072
    Location:1129
    Orexin; Prepro-orexin
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