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COL9A2 collagen type IX alpha 2 chain [ Canis lupus familiaris (dog) ]

Gene ID: 607609, updated on 25-Jul-2026
Official Symbol
COL9A2provided by VGNC
Official Full Name
collagen type IX alpha 2 chainprovided by VGNC
Primary source
VGNC:VGNC:39486
See related
Ensembl:ENSCAFG00845010158 RGD:12333287
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
Try the new Gene page
Try the new Transcripts and proteins table
See COL9A2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
32
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (2733779..2748412)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (2904860..2919446)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (2717552..2732160)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (2641314..2655909)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (2701522..2716112)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene ZFP69 zinc finger protein Neighboring gene small ArfGAP2 Neighboring gene small nucleolar RNA U13 Neighboring gene zinc metallopeptidase STE24 Neighboring gene transmembrane and coiled-coil domains 2

Preferred Names
collagen alpha-2(IX) chain
Names
collagen, type IX, alpha 2

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001197170.1NP_001184099.1  collagen alpha-2(IX) chain precursor

    See identical proteins and their annotated locations for NP_001184099.1

    Status: VALIDATED

    Source sequence(s)
    GU075881
    UniProtKB/TrEMBL
    A0A8I3NF38, E2DP67
    Related
    ENSCAFP00845013922.1, ENSCAFT00845017876.1
    Conserved Domains (1) summary
    pfam01391
    Location:255312
    Collagen; Collagen triple helix repeat (20 copies)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    2733779..2748412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    2641314..2655909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    2701522..2716112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    2717552..2732160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2904860..2919446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)