DNAJC1 DnaJ heat shock protein family (Hsp40) member C1 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: DNAJC1provided by VGNC
Official Full Name: DnaJ heat shock protein family (Hsp40) member C1provided by VGNC
Primary source: VGNC:VGNC:52128
See related: Ensembl:ENSCAFG00845008124 RGD:12355085
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: all
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Genomic context

Location:: chromosome: 2

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	2	NC_051806.1 (9375367..9582762)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	2	NC_006584.4 (9819072..10025890)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	2	NC_049223.1 (8948296..9155636)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	2	NC_049262.1 (8689010..8895069)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	2	NC_049743.1 (8773573..8979836)

Chromosome 2 - NC_051806.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

BAC_372-I19 (e-PCR)
- UniSTS:262158

Ybx1 (e-PCR), detects polymorphism
- UniSTS:265527

Ybx1 (e-PCR), detects polymorphism
- UniSTS:265528

SGC32110 (e-PCR)
- UniSTS:15523

FH3433 (e-PCR)
- UniSTS:263849

Ybx1 (e-PCR), detects polymorphism
- UniSTS:527608

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Component	Evidence Code	Pubs
located_in endomembrane system	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: dnaJ homolog subfamily C member 1

Names: DnaJ homolog subfamily C member 1; DnaJ protein homolog MTJ1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051806.1 Reference ROS_Cfam_1.0

Range

9375367..9582762

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038658151.1 → XP_038514079.1 dnaJ homolog subfamily C member 1

UniProtKB/TrEMBL

A0A8C0LNM6, A0A8C0LUU4, A0A8I3N7Z6

Related

ENSCAFP00845011097.1, ENSCAFT00845014327.1

Conserved Domains (2) summary

cd00167
Location:503 → 550

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00226
Location:66 → 127

DnaJ; DnaJ domain

Alternate UMICH_Zoey_3.1

Genomic

NC_049262.1 Alternate UMICH_Zoey_3.1

Range

8689010..8895069

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038469125.1 → XP_038325053.1

Conserved Domains (2) summary

cd00167
Location:503 → 550

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00226
Location:66 → 127

DnaJ; DnaJ domain

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049743.1 Alternate UNSW_CanFamBas_1.0

Range

8773573..8979836

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038594077.1 → XP_038450005.1

Conserved Domains (2) summary

cd00167
Location:503 → 550

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00226
Location:66 → 127

DnaJ; DnaJ domain

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049223.1 Alternate UU_Cfam_GSD_1.0

Range

8948296..9155636

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038529829.1 → XP_038385757.1 dnaJ homolog subfamily C member 1

UniProtKB/TrEMBL

A0A8C0LNM6, A0A8C0LUU4, A0A8I3N7Z6

Conserved Domains (2) summary

cd00167
Location:503 → 550

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00226
Location:66 → 127

DnaJ; DnaJ domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

9819072..10025890

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_844389.6 → XP_849482.1 dnaJ homolog subfamily C member 1

UniProtKB/TrEMBL

A0A8C0LNM6, A0A8C0LUU4, A0A8I3N7Z6

Conserved Domains (2) summary

cd00167
Location:503 → 550

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00226
Location:66 → 127

DnaJ; DnaJ domain