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EFNB1 ephrin B1 [ Canis lupus familiaris (dog) ]

Gene ID: 607410, updated on 27-Jun-2026
Official Symbol
EFNB1provided by VGNC
Official Full Name
ephrin B1provided by VGNC
Primary source
VGNC:VGNC:40228
See related
Ensembl:ENSCAFG00845028672 RGD:12291112
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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Try the new Transcripts and proteins table
See EFNB1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (54257764..54270762)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (44117929..44130926)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (53478390..53491387)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (52225889..52238885)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (53554687..53567686)

Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-4-like Neighboring gene uncharacterized LOC119868452 Neighboring gene praja ring finger ubiquitin ligase 1 Neighboring gene uncharacterized LOC111094914

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Light-activated BioID - an optically activated proximity labeling system to study protein-protein interactions. Shafraz O, et al. J Cell Sci, 2023 Oct 1. PMID 37756605, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ephrin-B1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051843.1 Reference ROS_Cfam_1.0

    Range
    54257764..54270762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038450198.1 → XP_038306126.1  ephrin-B1

    UniProtKB/TrEMBL
    A0A8C0L2Y4, A0A8I3Q5V7
    Related
    ENSCAFP00845039724.1, ENSCAFT00845050673.1
    Conserved Domains (1) summary
    cd10426
    Location:31 → 165
    Ephrin-B_Ectodomain; Ectodomain of Ephrin B

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049299.1 Alternate UMICH_Zoey_3.1

    Range
    52225889..52238885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038523644.1 → XP_038379572.1  

    Conserved Domains (1) summary
    cd10426
    Location:31 → 165
    Ephrin-B_Ectodomain; Ectodomain of Ephrin B

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

    Range
    53554687..53567686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038652138.1 → XP_038508066.1  

    Conserved Domains (1) summary
    cd10426
    Location:31 → 165
    Ephrin-B_Ectodomain; Ectodomain of Ephrin B

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

    Range
    53478390..53491387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038587615.1 → XP_038443543.1  ephrin-B1

    UniProtKB/TrEMBL
    A0A8C0L2Y4, A0A8I3Q5V7
    Conserved Domains (1) summary
    cd10426
    Location:31 → 165
    Ephrin-B_Ectodomain; Ectodomain of Ephrin B

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    44117929..44130926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_844057.6 → XP_849150.4  ephrin-B1

    UniProtKB/TrEMBL
    A0A8C0L2Y4, A0A8I3Q5V7
    Conserved Domains (1) summary
    cd10426
    Location:31 → 165
    Ephrin-B_Ectodomain; Ectodomain of Ephrin B
Nucleotide Protein
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