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aqp9a aquaporin 9a [ Danio rerio (zebrafish) ]

Gene ID: 606660, updated on 14-Feb-2019

Summary

Official Symbol
aqp9aprovided by ZNC
Official Full Name
aquaporin 9aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050809-119
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
aqp9; aqp9l; zgc:112336
Annotation information
Annotation category: spans an assembly gap
Annotation category: partial on reference assembly

Genomic context

See aqp9a in Genome Data Viewer
Location:
chromosome: 25
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (172328..207918, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (87196..88041, complement)
103 previous assembly Zv9 (GCF_000002035.4) 25 NC_007136.5 (40036..40881, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene contactin 1a Neighboring gene disintegrin and metalloproteinase domain-containing protein 10-like Neighboring gene hepatic triacylglycerol lipase-like Neighboring gene ADAM metallopeptidase domain 10b Neighboring gene zgc:114188 Neighboring gene PCNA clamp associated factor Neighboring gene SRSF protein kinase 2-like Neighboring gene SRSF protein kinase 2 Neighboring gene pseudouridine synthase 7

Genomic regions, transcripts, and products

General gene information

Homology

Clone Names

  • MGC112336

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
arsenite transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
channel activity IEA
Inferred from Electronic Annotation
more info
 
glycerol transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
urea transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
water transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033096.1NP_001028268.1  aquaporin 9a

    See identical proteins and their annotated locations for NP_001028268.1

    Status: PROVISIONAL

    Source sequence(s)
    BC100051
    UniProtKB/TrEMBL
    Q498W2
    Conserved Domains (1) summary
    cl00200
    Location:11255
    MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    172328..207918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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