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LOC6039110 histone deacetylase HDAC1 [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6039110, updated on 26-Mar-2024

Summary

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Gene symbol
LOC6039110
Gene description
histone deacetylase HDAC1
See related
VectorBase:CQUJHB010590; EnsemblRapid:LOC6039110
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 3 NC_051863.1 (125245602..125254142, complement)

Chromosome 3 - NC_051863.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119769766 Neighboring gene contactin-associated protein-like 2 Neighboring gene tyrosine-protein kinase Src64B Neighboring gene uncharacterized LOC6039884 Neighboring gene uncharacterized protein K02A2.6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051863.1 Chromosome 3 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase HDAC1
Names
histone deacetylase Rpd3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051863.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    125245602..125254142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001848723.2 → XP_001848775.1  histone deacetylase HDAC1

    See identical proteins and their annotated locations for XP_001848775.1

    UniProtKB/TrEMBL
    B0WJ91
    Related
    XP_001848775.1, XM_001848723.2
    Conserved Domains (2) summary
    PTZ00063
    Location:6 → 453
    PTZ00063; histone deacetylase; Provisional
    cl17011
    Location:5 → 372
    Arginase_HDAC; Arginase-like and histone-like hydrolases
Nucleotide Protein Strain
Heading Accession and Version

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