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AVPI1 arginine vasopressin induced 1 [ Homo sapiens (human) ]

Gene ID: 60370, updated on 13-Mar-2020

Summary

Official Symbol
AVPI1provided by HGNC
Official Full Name
arginine vasopressin induced 1provided by HGNC
Primary source
HGNC:HGNC:30898
See related
Ensembl:ENSG00000119986 MIM:618537
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
VIP32; VIT32; PP5395
Expression
Ubiquitous expression in adrenal (RPKM 14.7), colon (RPKM 12.7) and 25 other tissues See more
Orthologs

Genomic context

See AVPI1 in Genome Data Viewer
Location:
10q24.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (97677422..97687432, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (99437181..99447015, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene MORN repeat containing 4 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha Neighboring gene MARVEL domain containing 1 Neighboring gene zinc finger FYVE-type containing 27

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
activation of MAPK activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell cycle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
arginine vasopressin-induced protein 1
Names
AVP-induced protein 1
vasopressin-induced transcript

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021732.3NP_068378.2  arginine vasopressin-induced protein 1

    See identical proteins and their annotated locations for NP_068378.2

    Status: VALIDATED

    Source sequence(s)
    AL355315
    Consensus CDS
    CCDS7470.1
    UniProtKB/Swiss-Prot
    Q5T686
    Related
    ENSP00000359660.3, ENST00000370626.4
    Conserved Domains (1) summary
    pfam15063
    Location:270
    TC1; Thyroid cancer protein 1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    97677422..97687432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017016494.1XP_016871983.1  arginine vasopressin-induced protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5T686
    Conserved Domains (1) summary
    pfam15063
    Location:270
    TC1; Thyroid cancer protein 1
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