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AO090003000728 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5991858, updated on 21-Dec-2023

Summary

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Gene symbol
AO090003000728
Gene description
hypothetical protein
Locus tag
AO090003000728
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_036436.1 (4052816..4054744, complement)

Chromosome 2 - NC_036436.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036436.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_023090069.1
  • predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036436.1 Reference assembly

    Range
    4052816..4054744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023235007.1 → XP_023090069.1  unnamed protein product [Aspergillus oryzae RIB40]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I7ZWR2, Q2UKP2
    Conserved Domains (2) summary
    cd02662
    Location:48 → 599
    Peptidase_C19F; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:47 → 441
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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