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SNOG_12851 hypothetical protein [ Parastagonospora nodorum SN15 ]

Gene ID: 5979982, updated on 16-Nov-2023

Summary

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Gene symbol
SNOG_12851
Gene description
hypothetical protein
Locus tag
SNOG_12851
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Parastagonospora nodorum SN15 (strain: SN15)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora
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Genomic context

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See SNOG_12851 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_001884572.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001884572.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • gene prediction version 2

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_001803069.1
  • gene prediction version 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001884572.1 Reference assembly

    Range
    134998..140080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001803017.1 → XP_001803069.1  hypothetical protein SNOG_12851 [Parastagonospora nodorum SN15]

    See identical proteins and their annotated locations for XP_001803069.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7U2I5G5, Q0U5W3
    Conserved Domains (3) summary
    COG5560
    Location:595 → 1396
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
    cl02553
    Location:1267 → 1391
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam06337
    Location:280 → 385
    DUSP; DUSP domain
Nucleotide Protein
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