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SNOG_10525 hypothetical protein [ Parastagonospora nodorum SN15 ]

Gene ID: 5977701, updated on 7-Sep-2017
Gene symbol
SNOG_10525
Gene description
hypothetical protein
Locus tag
SNOG_10525
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Parastagonospora nodorum SN15 (strain: SN15, old-name: Phaeosphaeria nodorum SN15)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora
Location:
chromosome: Unknown
Exon count:
1

NW_001884565.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
hypothetical protein
XP_001800794.1
  • gene prediction version 2

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001884565.1 Reference assembly

    Range
    316812..320227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001800742.1XP_001800794.1  hypothetical protein SNOG_10525 [Parastagonospora nodorum SN15]

    See identical proteins and their annotated locations for XP_001800794.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q0UCI9
    Conserved Domains (5) summary
    cd07968
    Location:528674
    OBF_DNA_ligase_IV; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase IV is a DNA-binding module that is part of the catalytic core unit
    cd07903
    Location:282524
    Adenylation_DNA_ligase_IV; Adenylation domain of DNA Ligase IV
    smart00292
    Location:730806
    BRCT; breast cancer carboxy-terminal domain
    TIGR00574
    Location:122681
    dnl1; DNA ligase I, ATP-dependent (dnl1)
    pfam04675
    Location:42246
    DNA_ligase_A_N; DNA ligase N terminus
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