U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALX4 ALX homeobox 4 [ Bos taurus (domestic cattle) ]

Gene ID: 594846, updated on 30-Jan-2025
Gene symbol
ALX4
Gene description
ALX homeobox 4
See related
BGD:BT13616; EnsemblRapid:ENSBTAG00070029189
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See ALX4 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (74373004..74417594, complement)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) Neighboring gene exostosin glycosyltransferase 2 Neighboring gene small nucleolar RNA SNORA61 Neighboring gene uncharacterized LOC112441654 Neighboring gene CD82 molecule

Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. The bovine aristaless-like homeobox 4 (ALX4) as a candidate gene for syndactyly. Wöhlke A, et al. Cytogenet Genome Res, 2006. PMID 17065792
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
homeobox protein aristaless-like 4
Names
aristaless-like homeobox 4

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030304.1 → NP_001025475.1  homeobox protein aristaless-like 4

    See identical proteins and their annotated locations for NP_001025475.1

    Status: PROVISIONAL

    Source sequence(s)
    AM048630
    UniProtKB/Swiss-Prot
    Q4LAL6
    Related
    ENSBTAP00070040375.1, ENSBTAT00070066316.1
    Conserved Domains (2) summary
    pfam00046
    Location:204 → 256
    Homeobox; Homeobox domain
    pfam03826
    Location:373 → 390
    OAR; OAR domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    74373004..74417594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4LAL6.1 GenPept UniProtKB/Swiss-Prot:Q4LAL6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials