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LOC580363 transcription factor VBP [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 580363, updated on 30-Sep-2019

Summary

Gene symbol
LOC580363
Gene description
transcription factor VBP
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus

Genomic context

See LOC580363 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145611.1 (37495847..37497777)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577685.1 (152040..155992)

NW_022145611.1Genomic Context describing neighboring genes Neighboring gene testis-specific expressed protein 55-like Neighboring gene citrate synthase-lysine N-methyltransferase CSKMT, mitochondrial-like Neighboring gene signal recognition particle 54 kDa protein Neighboring gene DNA mismatch repair protein Mlh3

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145611.1 Reference Spur_5.0 Primary Assembly

    Range
    37495847..37497777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_780426.5XP_785519.3  transcription factor VBP

    Conserved Domains (1) summary
    cd14695
    Location:176234
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
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