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ANKRD36B ankyrin repeat domain 36B [ Homo sapiens (human) ]

Gene ID: 57730, updated on 13-Mar-2020

Summary

Official Symbol
ANKRD36Bprovided by HGNC
Official Full Name
ankyrin repeat domain 36Bprovided by HGNC
Primary source
HGNC:HGNC:29333
See related
Ensembl:ENSG00000196912
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KIAA1641
Expression
Ubiquitous expression in bone marrow (RPKM 3.8), testis (RPKM 3.0) and 24 other tissues See more

Genomic context

See ANKRD36B in Genome Data Viewer
Location:
2q11.2
Exon count:
47
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (97492663..97590337, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (98109009..98206708, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa variable 2/OR2-10 (pseudogene) Neighboring gene uncharacterized LOC107985920 Neighboring gene uncharacterized LOC100506123 Neighboring gene uncharacterized LOC105373499 Neighboring gene UBTF like 6 (pseudogene)

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ21281, FLJ90089, KIAA1641, MGC149864, MGC149865, MGC167812

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
ankyrin repeat domain-containing protein 36B
Names
CLL-associated antigen KW-1
melanoma-associated antigen

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001353337.2NP_001340266.1  ankyrin repeat domain-containing protein 36B isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
    Source sequence(s)
    AC017099
    Conserved Domains (2) summary
    cd00204
    Location:24139
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  2. NM_025190.3NP_079466.3  ankyrin repeat domain-containing protein 36B isoform 1

    See identical proteins and their annotated locations for NP_079466.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC017099
    Consensus CDS
    CCDS74543.1
    UniProtKB/Swiss-Prot
    Q8N2N9
    Related
    ENSP00000481149.1, ENST00000258459.11
    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:8291028
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9491239
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    97492663..97590337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006712661.2XP_006712724.1  ankyrin repeat domain-containing protein 36B isoform X1

    See identical proteins and their annotated locations for XP_006712724.1

    UniProtKB/Swiss-Prot
    Q8N2N9
    Related
    ENSP00000477778.1, ENST00000359901.8
    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:8291028
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9491239
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  2. XM_005263995.5XP_005264052.1  ankyrin repeat domain-containing protein 36B isoform X1

    See identical proteins and their annotated locations for XP_005264052.1

    UniProtKB/Swiss-Prot
    Q8N2N9
    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:8291028
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9491239
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  3. XM_017004588.2XP_016860077.1  ankyrin repeat domain-containing protein 36B isoform X12

    Conserved Domains (1) summary
    pfam14915
    Location:702992
    CCDC144C; CCDC144C protein coiled-coil region
  4. XM_017004589.2XP_016860078.1  ankyrin repeat domain-containing protein 36B isoform X13

    Conserved Domains (1) summary
    pfam14915
    Location:698988
    CCDC144C; CCDC144C protein coiled-coil region
  5. XM_017004583.2XP_016860072.1  ankyrin repeat domain-containing protein 36B isoform X7

    Conserved Domains (5) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam14662
    Location:783982
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9031193
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  6. XM_017004590.2XP_016860079.1  ankyrin repeat domain-containing protein 36B isoform X14

    Related
    ENSP00000484402.1, ENST00000438709.6
  7. XM_017004594.2XP_016860083.1  ankyrin repeat domain-containing protein 36B isoform X16

  8. XM_017004595.2XP_016860084.1  ankyrin repeat domain-containing protein 36B isoform X16

  9. XM_017004585.2XP_016860074.1  ankyrin repeat domain-containing protein 36B isoform X9

    Conserved Domains (2) summary
    pfam14662
    Location:607806
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:7271017
    CCDC144C; CCDC144C protein coiled-coil region
  10. XM_017004593.2XP_016860082.1  ankyrin repeat domain-containing protein 36B isoform X16

  11. XM_017004592.2XP_016860081.1  ankyrin repeat domain-containing protein 36B isoform X16

  12. XM_017004587.2XP_016860076.1  ankyrin repeat domain-containing protein 36B isoform X11

  13. XM_024453026.1XP_024308794.1  ankyrin repeat domain-containing protein 36B isoform X10

    Conserved Domains (2) summary
    pfam14915
    Location:7171007
    CCDC144C; CCDC144C protein coiled-coil region
    cl25732
    Location:4801110
    SMC_N; RecF/RecN/SMC N terminal domain
  14. XM_017004580.2XP_016860069.1  ankyrin repeat domain-containing protein 36B isoform X4

    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:795994
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9151205
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  15. XM_017004581.2XP_016860070.1  ankyrin repeat domain-containing protein 36B isoform X5

  16. XM_017004584.2XP_016860073.1  ankyrin repeat domain-containing protein 36B isoform X8

    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:727926
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:8471137
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  17. XM_017004582.2XP_016860071.1  ankyrin repeat domain-containing protein 36B isoform X6

    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:795994
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9151205
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  18. XM_017004579.2XP_016860068.1  ankyrin repeat domain-containing protein 36B isoform X3

    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:795994
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9151205
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  19. XM_017004578.2XP_016860067.1  ankyrin repeat domain-containing protein 36B isoform X2

    Conserved Domains (6) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    pfam14662
    Location:8281027
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam14915
    Location:9481238
    CCDC144C; CCDC144C protein coiled-coil region
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  20. XM_024453027.1XP_024308795.1  ankyrin repeat domain-containing protein 36B isoform X19

    Conserved Domains (2) summary
    pfam14915
    Location:362652
    CCDC144C; CCDC144C protein coiled-coil region
    cl25732
    Location:125755
    SMC_N; RecF/RecN/SMC N terminal domain
  21. XM_011511558.2XP_011509860.1  ankyrin repeat domain-containing protein 36B isoform X18

    Conserved Domains (4) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  22. XM_011511556.2XP_011509858.1  ankyrin repeat domain-containing protein 36B isoform X15

    See identical proteins and their annotated locations for XP_011509858.1

    Conserved Domains (4) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  23. XM_011511555.2XP_011509857.1  ankyrin repeat domain-containing protein 36B isoform X15

    See identical proteins and their annotated locations for XP_011509857.1

    Conserved Domains (4) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]
  24. XM_011511557.3XP_011509859.1  ankyrin repeat domain-containing protein 36B isoform X17

    Conserved Domains (4) summary
    cd00204
    Location:47172
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:24116
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171225
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:5483
    ANK; ANK repeat [structural motif]

RNA

  1. XR_001738871.1 RNA Sequence

  2. XR_922976.2 RNA Sequence

  3. XR_001738869.2 RNA Sequence

  4. XR_002959321.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_020970.1: Suppressed sequence

    Description
    NM_020970.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
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