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KIAA1522 KIAA1522 [ Homo sapiens (human) ]

Gene ID: 57648, updated on 12-Oct-2019

Summary

Official Symbol
KIAA1522provided by HGNC
Official Full Name
KIAA1522provided by HGNC
Primary source
HGNC:HGNC:29301
See related
Ensembl:ENSG00000162522
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in skin (RPKM 27.9), duodenum (RPKM 23.6) and 20 other tissues See more
Orthologs

Genomic context

See KIAA1522 in Genome Data Viewer
Location:
1p35.1
Exon count:
9
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (32741830..32774970)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (33207492..33240571)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RB binding protein 4, chromatin remodeling factor Neighboring gene syncoilin, intermediate filament protein Neighboring gene Sharpr-MPRA regulatory region 8469 Neighboring gene tyrosyl-tRNA synthetase 1 Neighboring gene S100P binding protein Neighboring gene fibronectin type III domain containing 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein KIAA1522

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198972.2NP_001185901.1  uncharacterized protein KIAA1522 isoform 2

    See identical proteins and their annotated locations for NP_001185901.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has an alternate 5' exon compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1.
    Source sequence(s)
    AB040955, AC114489, AK298965, BC004879
    Consensus CDS
    CCDS55588.1
    UniProtKB/Swiss-Prot
    Q9P206
    Related
    ENSP00000362579.1, ENST00000373480.1
    Conserved Domains (1) summary
    PHA03247
    Location:7241000
    PHA03247; large tegument protein UL36; Provisional
  2. NM_001198973.2NP_001185902.1  uncharacterized protein KIAA1522 isoform 3

    See identical proteins and their annotated locations for NP_001185902.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) has an alternate 5' exon and lacks two consecutive in-frame coding exons compared to variant 1. The resulting isoform (3) has a shorter and distinct N-terminus and lacks an internal segment compared to isoform 1.
    Source sequence(s)
    AB040955, AC114489, AK298965
    Consensus CDS
    CCDS55589.1
    UniProtKB/Swiss-Prot
    Q9P206
    Related
    ENSP00000294521.3, ENST00000294521.7
  3. NM_001369553.1NP_001356482.1  uncharacterized protein KIAA1522 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC114489
    Related
    ENSP00000362580.3, ENST00000373481.7
    Conserved Domains (1) summary
    PHA03247
    Location:7351011
    PHA03247; large tegument protein UL36; Provisional
  4. NM_020888.3NP_065939.2  uncharacterized protein KIAA1522 isoform 1

    See identical proteins and their annotated locations for NP_065939.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AB040955, AC114489, AI587184, AL713671
    Consensus CDS
    CCDS41298.1
    UniProtKB/Swiss-Prot
    Q9P206
    Related
    ENSP00000383851.2, ENST00000401073.7
    Conserved Domains (1) summary
    PHA03247
    Location:7831059
    PHA03247; large tegument protein UL36; Provisional

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    32741830..32774970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017001917.1XP_016857406.1  uncharacterized protein KIAA1522 isoform X3

  2. XM_017001916.1XP_016857405.1  uncharacterized protein KIAA1522 isoform X2

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