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BAHCC1 BAH domain and coiled-coil containing 1 [ Homo sapiens (human) ]

Gene ID: 57597, updated on 4-Oct-2020

Summary

Official Symbol
BAHCC1provided by HGNC
Official Full Name
BAH domain and coiled-coil containing 1provided by HGNC
Primary source
HGNC:HGNC:29279
See related
Ensembl:ENSG00000266074 MIM:617646
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BAHD2
Expression
Ubiquitous expression in fat (RPKM 2.7), prostate (RPKM 2.1) and 25 other tissues See more
Orthologs

Genomic context

See BAHCC1 in Genome Data Viewer
Location:
17q25.3
Exon count:
30
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (81395431..81466331)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (79373540..79433358)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene basic proline-rich protein-like Neighboring gene uncharacterized LOC100130370 Neighboring gene microRNA 4740 Neighboring gene uncharacterized LOC105371926 Neighboring gene microRNA 3186 Neighboring gene uncharacterized LOC112268189 Neighboring gene CRISPRi-validated cis-regulatory element chr17.6006 Neighboring gene long intergenic non-protein coding RNA 1971

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ23058, KIAA1447

Gene Ontology Provided by GOA

Function Evidence Code Pubs
chromatin binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
BAH and coiled-coil domain-containing protein 1
Names
BAH domain-containing protein 2
bromo adjacent homology domain-containing protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001291324.3NP_001278253.1  BAH and coiled-coil domain-containing protein 1 isoform 1

    See identical proteins and their annotated locations for NP_001278253.1

    Status: VALIDATED

    Source sequence(s)
    AC110285, AC139149, AC213194
    Consensus CDS
    CCDS74173.1
    UniProtKB/Swiss-Prot
    Q9P281
    UniProtKB/TrEMBL
    A0A075B747
    Related
    ENSP00000462154.4, ENST00000584436.7
    Conserved Domains (2) summary
    cd04714
    Location:25122631
    BAH_BAHCC1; BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the ...
    cl26464
    Location:8501253
    Atrophin-1; Atrophin-1 family
  2. NM_001377448.1NP_001364377.1  BAH and coiled-coil domain-containing protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC110285, AC139149, AC213194
    Related
    ENSP00000502710.1, ENST00000675386.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    81395431..81466331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017024898.2XP_016880387.1  BAH and coiled-coil domain-containing protein 1 isoform X1

    Conserved Domains (1) summary
    cd04714
    Location:25042623
    BAH_BAHCC1; BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the ...
  2. XM_011525063.2XP_011523365.1  BAH and coiled-coil domain-containing protein 1 isoform X2

    Conserved Domains (1) summary
    cd04714
    Location:25042623
    BAH_BAHCC1; BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the ...
  3. XM_024450844.1XP_024306612.1  BAH and coiled-coil domain-containing protein 1 isoform X4

    Conserved Domains (2) summary
    cd04714
    Location:23202439
    BAH_BAHCC1; BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the ...
    cl26464
    Location:6581061
    Atrophin-1; Atrophin-1 family

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001080519.2: Suppressed sequence

    Description
    NM_001080519.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
  2. NM_024696.1: Suppressed sequence

    Description
    NM_024696.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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