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Rpb12 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 5740790, updated on 6-Aug-2017
Official Symbol
Rpb12provided by FlyBase
Primary source
FLYBASE:FBgn0262954
Locus tag
Dmel_CG34186
Gene type
protein coding
RNA name
Rpb12
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG34186; Dmel\CG34186; RPB12
Location:
51E2-51E2
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (15144968..15145519, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (11032473..11033024, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene charlatan Neighboring gene CG8089 gene product from transcript CG8089-RA Neighboring gene CG7544 gene product from transcript CG7544-RB

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA-directed 5'-3' RNA polymerase activity NAS
Non-traceable Author Statement
more info
PubMed 
contributes_to RNA polymerase I activity IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to RNA polymerase II activity IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to RNA polymerase III activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
transcription from RNA polymerase II promoter ISS
Inferred from Sequence or Structural Similarity
more info
 
transcription from RNA polymerase II promoter NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
DNA-directed RNA polymerase I complex IBA
Inferred from Biological aspect of Ancestor
more info
 
DNA-directed RNA polymerase II, core complex IBA
Inferred from Biological aspect of Ancestor
more info
 
DNA-directed RNA polymerase II, core complex ISS
Inferred from Sequence or Structural Similarity
more info
 
DNA-directed RNA polymerase II, core complex NAS
Non-traceable Author Statement
more info
PubMed 
DNA-directed RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
CG34186 gene product from transcript CG34186-RA
Names
CG34186-PA
Rpb12
Rpb12-PA
NP_001097319.1

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    15144968..15145519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001103849.3NP_001097319.1  Rpb12 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097319.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6IGE3
    Related
    FBpp0111294, FBtr0112379
    Conserved Domains (1) summary
    smart00659
    Location:1457
    RPOLCX; RNA polymerase subunit CX
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