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zgc:113983 zgc:113983 [ Danio rerio (zebrafish) ]

Gene ID: 573992, updated on 27-Mar-2024

Summary

Official Symbol
zgc:113983provided by ZNC
Official Full Name
zgc:113983provided by ZNC
Primary source
ZFIN:ZDB-GENE-050626-58
See related
Ensembl:ENSDARG00000068941 AllianceGenome:ZFIN:ZDB-GENE-050626-58
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:113984; zgc:158629; si:dkeyp-46h3.6
Summary
Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
chromosome: 25
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (35062353..35063658)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (34557395..34558700)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:dkey-108k21.12 Neighboring gene si:dkey-108k21.13 Neighboring gene si:dkey-108k21.15 Neighboring gene zgc:165555

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025171.2NP_001020342.2  histone H3.2

    Status: VALIDATED

    Source sequence(s)
    CU302436
    UniProtKB/Swiss-Prot
    A2VD42, Q4QRF4
    Related
    ENSDARP00000084277.3, ENSDART00000089844.5

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    35062353..35063658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)