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Ccr1 C-C motif chemokine receptor 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 57301, updated on 5-Sep-2025
Official Symbol
Ccr1provided by RGD
Official Full Name
C-C motif chemokine receptor 1provided by RGD
Primary source
RGD:708446
See related
Ensembl:ENSRNOG00000086224 AllianceGenome:RGD:708446
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables C-C chemokine binding activity. Involved in cellular response to transforming growth factor beta stimulus; cellular response to tumor necrosis factor; and cerebellum development. Located in neuronal cell body. Used to study colitis. Biomarker of anterior uveitis. Human ortholog(s) of this gene implicated in allergic contact dermatitis and rheumatoid arthritis. Orthologous to human CCR1 (C-C motif chemokine receptor 1). [provided by Alliance of Genome Resources, Jul 2025]
Expression
Biased expression in Lung (RPKM 74.6), Spleen (RPKM 54.4) and 9 other tissues See more
Orthologs
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See Ccr1 in Genome Data Viewer
Location:
8q32
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (132433711..132439266, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (123556286..123561841, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (132996646..133002201, complement)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene X-C motif chemokine receptor 1 Neighboring gene CDK2-associated, cullin domain 1, pseudogene 1 Neighboring gene transcription initiation factor TFIID subunit 13-like Neighboring gene chemokine (C-C motif) receptor 1-like 1 Neighboring gene C-C motif chemokine receptor 3 Neighboring gene Tarbp2 subunit of RISC loading complex, pseudogene 1

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
Preferred Names
C-C chemokine receptor type 1
Names
chemokine (C-C motif) receptor 1
macrophage inflammatory protein-1 alpha receptor

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_020542.2NP_065417.1  C-C chemokine receptor type 1

    See identical proteins and their annotated locations for NP_065417.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079207
    UniProtKB/TrEMBL
    A6I4C9, Q6AY38, Q9JLY8
    Related
    ENSRNOP00000099951.1, ENSRNOT00000122987.1
    Conserved Domains (1) summary
    pfam00001
    Location:51301
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    132433711..132439266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063266045.1XP_063122115.1  C-C chemokine receptor type 1 isoform X1

    UniProtKB/TrEMBL
    A6I4C9, Q6AY38, Q9JLY8
    Related
    ENSRNOP00000105167.1, ENSRNOT00000121287.1