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PGM5-AS1 PGM5 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 572558, updated on 9-Jun-2025
Official Symbol
PGM5-AS1provided by HGNC
Official Full Name
PGM5 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44181
See related
Ensembl:ENSG00000224958 AllianceGenome:HGNC:44181
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM233A
Expression
Biased expression in prostate (RPKM 31.6), endometrium (RPKM 17.6) and 4 other tissues See more
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Location:
9q21.11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (68355164..68357866, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (80528761..80531472, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (70970080..70972782, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929800 Neighboring gene uncharacterized LOC102723624 Neighboring gene phosphoglucomutase 5 Neighboring gene uncharacterized LOC105376070 Neighboring gene uncharacterized LOC124902174

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Other Names

  • PGM5 antisense RNA 1 (non-protein coding)
  • family with sequence similarity 233, member A

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015423.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate splice site at the 5' terminal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AY343894, BC017938, CB051276
    Related
    ENST00000417887.1
  2. NR_121191.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    BC017938, CB051276
    Related
    ENST00000763105.1
  3. NR_121192.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site at the 5' terminal exon and contains an alternate internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL353608
    Related
    ENST00000420855.7

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    68355164..68357866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    80528761..80531472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)