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uncharacterized protein [ Chlamydomonas reinhardtii ]

Gene ID: 5718949, updated on 18-Sep-2024
Official Full Name
uncharacterized protein
Primary source
Phytozome:Cre03.g199800
Locus tag
CHLRE_03g199800v5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chlamydomonas reinhardtii (strain: CC-503 cw92 mt+)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Old locus tag
CHLREDRAFT_183963
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Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_057006.1 (8216108..8220752, complement)

Chromosome 3 - NC_057006.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic Sequence:
NC_057006.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The maturase HydF enables [FeFe] hydrogenase assembly via transient, cofactor-dependent interactions. Németh B, et al. J Biol Chem, 2020 Aug 14. PMID 32620553, Free PMC Article
  2. How [FeFe]-Hydrogenase Facilitates Bidirectional Proton Transfer. Senger M, et al. J Am Chem Soc, 2019 Oct 30. PMID 31580662, Free PMC Article
  3. The structure of the active site H-cluster of [FeFe] hydrogenase from the green alga Chlamydomonas reinhardtii studied by X-ray absorption spectroscopy. Stripp S, et al. Biochemistry, 2009 Jun 9. PMID 19397274
  4. Stepwise isotope editing of [FeFe]-hydrogenases exposes cofactor dynamics. Senger M, et al. Proc Natl Acad Sci U S A, 2016 Jul 26. PMID 27432985, Free PMC Article
  5. Spectroscopic Investigations of [FeFe] Hydrogenase Maturated with [(57)Fe2(adt)(CN)2(CO)4](2-). Gilbert-Wilson R, et al. J Am Chem Soc, 2015 Jul 22. PMID 26091969, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The maturase HydF enables [FeFe] hydrogenase assembly via transient, cofactor-dependent interactions.
    Title: The maturase HydF enables [FeFe] hydrogenase assembly via transient, cofactor-dependent interactions.
  2. How [FeFe]-Hydrogenase Facilitates Bidirectional Proton Transfer.
    Title: How [FeFe]-Hydrogenase Facilitates Bidirectional Proton Transfer.
  3. The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.
    Title: The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.
  4. Data indicate that [FeFe]-hydrogenase HYDA1 catalyze biological hydrogen turnover as it exclusively binds the H-cluster.
    Title: Stepwise isotope editing of [FeFe]-hydrogenases exposes cofactor dynamics.
  5. Data show that an anaerobic locality in the chloroplast preserves [FeFe]-hydrogenase activity and supports continuous hydrogen production
    Title: Microoxic Niches within the Thylakoid Stroma of Air-Grown Chlamydomonas reinhardtii Protect [FeFe]-Hydrogenase and Support Hydrogen Production under Fully Aerobic Environment.
  6. The iron hydrogenase, HYDA1, is characterized by Mossbauer, HYSCORE, ENDOR, and nuclear resonance vibrational spectroscopy.
    Title: Spectroscopic Investigations of [FeFe] Hydrogenase Maturated with [(57)Fe2(adt)(CN)2(CO)4](2-).
  7. Complex of Ferredoxin and [FeFe] Hydrogenase from Chlamydomonas reinhardtii
    Title: Structural Insight into the Complex of Ferredoxin and [FeFe] Hydrogenase from Chlamydomonas reinhardtii.
  8. Hydrogenase activity and state transition ability are both critical for activation of photosynthesis in the absence of O2oxygen
    Title: Function of the chloroplast hydrogenase in the microalga Chlamydomonas: the role of hydrogenase and state transitions during photosynthetic activation in anaerobiosis.
  9. These combined results prove that CRR1 is involved in HYDA1 promoter activation.
    Title: Differential expression of the Chlamydomonas [FeFe]-hydrogenase-encoding HYDA1 gene is regulated by the copper response regulator1.
  10. HYD1 expression, while visibly reduced in presence of high oxygen (Figure 3), was not eliminated completely as was observed for PFR1.
    Title: Distinct mechanisms regulating gene expression coexist within the fermentative pathways in Chlamydomonas reinhardtii.
Submit: New GeneRIF Correction See all GeneRIFs (15)

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uncharacterized protein

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057006.1 Reference assembly

    Range
    8216108..8220752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001693324.2 → XP_001693376.1  uncharacterized protein CHLRE_03g199800v5 [Chlamydomonas reinhardtii]

    See identical proteins and their annotated locations for XP_001693376.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9FYU1
    Conserved Domains (2) summary
    TIGR02512
    Location:66 → 430
    FeFe_hydrog_A; [FeFe] hydrogenase, group A
    pfam02256
    Location:435 → 487
    Fe_hyd_SSU; Iron hydrogenase small subunit
Nucleotide Protein
Heading Accession and Version

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