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med1 mediator complex subunit 1 [ Danio rerio (zebrafish) ]

Gene ID: 571519, updated on 2-Oct-2018

Summary

Official Symbol
med1provided by ZNC
Official Full Name
mediator complex subunit 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-081104-257
See related
Ensembl:ENSDARG00000075340
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
si:ch73-210n19.1
Orthologs

Genomic context

See med1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (15273103..15313929)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (15235002..15270877)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene ADP-ribosylarginine hydrolase Neighboring gene sulfotransferase family 1, cytosolic sulfotransferase 6 Neighboring gene uncharacterized LOC108191789 Neighboring gene plexin domain containing 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
transcription coregulator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mediator complex IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mediator of RNA polymerase II transcription subunit 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    15273103..15313929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021480457.1XP_021336132.1  mediator of RNA polymerase II transcription subunit 1 isoform X1

    Conserved Domains (1) summary
    pfam10744
    Location:88454
    Med1; Mediator of RNA polymerase II transcription subunit 1
  2. XM_021480458.1XP_021336133.1  mediator of RNA polymerase II transcription subunit 1 isoform X2

    Related
    ENSDARP00000149053.1, ENSDART00000186656.1
    Conserved Domains (1) summary
    pfam10744
    Location:88454
    Med1; Mediator of RNA polymerase II transcription subunit 1
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