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UTP3 UTP3 small subunit processome component [ Homo sapiens (human) ]

Gene ID: 57050, updated on 7-Jun-2020

Summary

Official Symbol
UTP3provided by HGNC
Official Full Name
UTP3 small subunit processome componentprovided by HGNC
Primary source
HGNC:HGNC:24477
See related
Ensembl:ENSG00000132467 MIM:611614
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CRL1; CRLZ1; SAS10
Orthologs

Genomic context

See UTP3 in Genome Data Viewer
Location:
4q13.3
Exon count:
1
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (70688532..70690551)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (71554196..71556268)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene joining chain of multimeric IgA and IgM Neighboring gene uncharacterized LOC101927297 Neighboring gene RNA, U6 small nuclear 520, pseudogene Neighboring gene RNA, U6 small nuclear 784, pseudogene

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ23256

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
brain development ISS
Inferred from Sequence or Structural Similarity
more info
 
chromatin organization IEA
Inferred from Electronic Annotation
more info
 
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
rRNA processing TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
something about silencing protein 10
Names
UTP3 homolog
UTP3, small subunit processome component homolog
charged amino acid rich leucine zipper 1 homolog
charged amino acid-rich leucine zipper 1
disrupter of silencing 10
disrupter of silencing SAS10

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_020368.3NP_065101.1  something about silencing protein 10

    See identical proteins and their annotated locations for NP_065101.1

    Status: VALIDATED

    Source sequence(s)
    AK026909
    Consensus CDS
    CCDS3546.1
    UniProtKB/Swiss-Prot
    Q9NQZ2
    Related
    ENSP00000254803.2, ENST00000254803.4
    Conserved Domains (2) summary
    pfam04000
    Location:230309
    Sas10_Utp3; Sas10/Utp3/C1D family
    pfam09368
    Location:408478
    Sas10; Sas10 C-terminal domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    70688532..70690551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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