Format

Send to:

Choose Destination

RSRP1 arginine and serine rich protein 1 [ Homo sapiens (human) ]

Gene ID: 57035, updated on 9-Feb-2020

Summary

Official Symbol
RSRP1provided by HGNC
Official Full Name
arginine and serine rich protein 1provided by HGNC
Primary source
HGNC:HGNC:25234
See related
Ensembl:ENSG00000117616
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NPD014; C1orf63
Expression
Ubiquitous expression in spleen (RPKM 20.3), prostate (RPKM 18.6) and 25 other tissues See more
Orthologs

Genomic context

See RSRP1 in Genome Data Viewer
Location:
1p36.11
Exon count:
10
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (25242237..25338254, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (25568740..25574010, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene IFITM3 pseudogene 7 Neighboring gene SYF2 pre-mRNA splicing factor Neighboring gene uncharacterized LOC105376882 Neighboring gene Rh blood group D antigen Neighboring gene succinate dehydrogenase complex subunit D pseudogene 6 Neighboring gene transmembrane protein 50A Neighboring gene Rh blood group CcEe antigens Neighboring gene succinate dehydrogenase complex subunit D pseudogene 7

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC43558

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
arginine/serine-rich protein 1
Names
UPF0471 protein C1orf63

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001321772.1NP_001308701.1  arginine/serine-rich protein 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (14) initiates transcription from an upstream promoter compared to variant 2. Variants 1 and 14 encode the same protein.
    Source sequence(s)
    AL031432, AL928711
    Consensus CDS
    CCDS260.1
    UniProtKB/Swiss-Prot
    Q9BUV0
    UniProtKB/TrEMBL
    A0A024RAH6
    Conserved Domains (1) summary
    pfam17069
    Location:1290
    RSRP; Arginine/Serine-Rich protein 1
  2. NM_020317.5NP_064713.3  arginine/serine-rich protein 1

    See identical proteins and their annotated locations for NP_064713.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) encodes the supported protein, which is also encoded by variant 14.
    Source sequence(s)
    AK226012, AK292532, BC001892, BM875537, DA471865
    Consensus CDS
    CCDS260.1
    UniProtKB/Swiss-Prot
    Q9BUV0
    UniProtKB/TrEMBL
    A0A024RAH6
    Related
    ENSP00000243189.7, ENST00000243189.12
    Conserved Domains (1) summary
    pfam17069
    Location:1290
    RSRP; Arginine/Serine-Rich protein 1

RNA

  1. NR_135143.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses alternate splice sites in an internal exon, compared to variant 2. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AF247168, AK027318, AK292532, BM875537, DA471865
    Related
    ENST00000498238.1
  2. NR_135144.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) uses an alternate splice site in an internal exon, compared to variant 2. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK226012, AK292532, BC041843, BM875537, DA471865
    Related
    ENST00000568254.5
  3. NR_135777.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) initiates at an alternate promoter compared to variant 2.
    Source sequence(s)
    AL031432
  4. NR_135778.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  5. NR_135780.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  6. NR_135781.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  7. NR_135782.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  8. NR_135783.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  9. NR_135784.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  10. NR_135785.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  11. NR_135786.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL031432
  12. NR_135787.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (15) initiates transcription from an upstream promoter compared to variant 2.
    Source sequence(s)
    AL031432, AL928711, BC041843
    Related
    ENST00000473314.6
  13. NR_135788.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (16) initiates transcription from an upstream promoter compared to variant 2.
    Source sequence(s)
    AL031432, AL928711
  14. NR_135789.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (17) initiates transcription from an upstream promoter compared to variant 2.
    Source sequence(s)
    AL031432, AL928711
  15. NR_135790.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (18) initiates transcription from an upstream promoter and lacks the coding region found in variant 2.
    Source sequence(s)
    AL928711
  16. NR_135791.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (19) initiates transcription from an upstream promoter and lacks the coding region found in variant 2.
    Source sequence(s)
    AL928711
  17. NR_135792.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (20) initiates transcription from an upstream promoter and lacks the coding region found in variant 2.
    Source sequence(s)
    AL928711
  18. NR_135793.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (21) initiates transcription from an upstream promoter and lacks the coding region found in variant 2.
    Source sequence(s)
    AL928711, DA760736

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    25242237..25338254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011541797.1XP_011540099.1  arginine/serine-rich protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011540099.1

    UniProtKB/Swiss-Prot
    Q9BUV0
    UniProtKB/TrEMBL
    A0A024RAH6
    Conserved Domains (1) summary
    pfam17069
    Location:1290
    RSRP; Arginine/Serine-Rich protein 1

RNA

  1. XR_946709.2 RNA Sequence

Support Center