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C2orf83 chromosome 2 open reading frame 83 [ Homo sapiens (human) ]

Gene ID: 56918, updated on 25-Oct-2022

Summary

Official Symbol
C2orf83provided by HGNC
Official Full Name
chromosome 2 open reading frame 83provided by HGNC
Gene description
folate transporter-like protein C2orf83
Primary source
HGNC:HGNC:25344
See related
Ensembl:ENSG00000290795 AllianceGenome:HGNC:25344
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable vitamin transmembrane transporter activity. Predicted to be involved in vitamin transmembrane transport. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See C2orf83 in Genome Data Viewer
Location:
2q36.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (227610090..227633320, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (228092745..228115991, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (228474806..228498036, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene small cysteine and glycine repeat containing 2 Neighboring gene small cysteine and glycine repeat containing 10 (gene/pseudogene) Neighboring gene spore coat protein SP96 Neighboring gene small cysteine and glycine repeat containing 3 Neighboring gene small cysteine and glycine repeat containing 4 Neighboring gene solute carrier family 19 member 3 pseudogene Neighboring gene small cysteine and glycine repeat containing 5

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Other Names

  • folate transporter-like protein C2orf83

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables vitamin transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in organic substance transport IEA
Inferred from Electronic Annotation
more info
 
involved_in vitamin transmembrane transport IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_172911.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC064853
    Related
    ENST00000409066.1
  2. NR_172912.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC064853
    Related
    ENST00000264387.8

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    227610090..227633320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    228092745..228115991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001162483.2: Suppressed sequence

    Description
    NM_001162483.2: This RefSeq was removed because it is now thought that this gene does encode a protein.
  2. NM_020161.4: Suppressed sequence

    Description
    NM_020161.4: This RefSeq was removed because it is now thought that this gene does not encode a protein.