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nars asparaginyl-tRNA synthetase [ Danio rerio (zebrafish) ]

Gene ID: 568332, updated on 1-Aug-2018

Summary

Official Symbol
narsprovided by ZNC
Official Full Name
asparaginyl-tRNA synthetaseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-1016
See related
Ensembl:ENSDARG00000061100 Vega:OTTDARG00000029091
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
fb57a10; wu:fb57a10; si:dkey-274m14.2
Orthologs

Genomic context

See nars in Genome Data Viewer
Location:
chromosome: 21
Exon count:
15
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (944697..965598)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (776908..797242, complement)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 1b Neighboring gene thioredoxin-like 1 Neighboring gene scavenger receptor class B, member 2c Neighboring gene liver-expressed antimicrobial peptide 2-like

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
asparagine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
asparaginyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 
tRNA aminoacylation for protein translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
asparaginyl-tRNA synthetase, cytoplasmic; asparagine--tRNA ligase, cytoplasmic
XP_696748.4

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    944697..965598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_691656.8XP_696748.4  asparagine--tRNA ligase, cytoplasmic

    Related
    ENSDARP00000121524.1, OTTDARP00000031863, ENSDART00000144766.2
    Conserved Domains (3) summary
    COG0017
    Location:168603
    AsnS; Aspartyl/asparaginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
    cd00776
    Location:280599
    AsxRS_core; Asx tRNA synthetase (AspRS/AsnRS) class II core domain. Assignment to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs in the core domain. This family includes AsnRS as well as ...
    cd04323
    Location:182264
    AsnRS_cyto_like_N; AsnRS_cyto_like_N: N-terminal, anticodon recognition domain of the type found in human and Saccharomyces cerevisiae cytoplasmic asparaginyl-tRNA synthetase (AsnRS), in Brugia malayai AsnRs and, in various putative bacterial AsnRSs. This domain is a ...
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