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pfkmb phosphofructokinase, muscle b [ Danio rerio (zebrafish) ]

Gene ID: 568001, updated on 4-Aug-2017
Official Symbol
pfkmbprovided by ZNC
Official Full Name
phosphofructokinase, muscle bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-081114-1
See related
Ensembl:ENSDARG00000060797 Vega:OTTDARG00000027224
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
im:7137110; wu:fc58g11
Location:
chromosome: 6
Exon count:
25
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (39739713..39772241, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (39742177..39774705, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene extra spindle pole bodies like 1, separase Neighboring gene integrin, beta 7 Neighboring gene complement component 1, q subcomponent-like 4b Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2

Markers

Homology

Clone Names

  • MGC162168

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
6-phosphofructokinase activity IEA
Inferred from Electronic Annotation
more info
 
ATP binding IEA
Inferred from Electronic Annotation
more info
 
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 
glycolytic process IEA
Inferred from Electronic Annotation
more info
 
metabolic process IEA
Inferred from Electronic Annotation
more info
 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
phosphofructokinase, muscle b

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089417.1NP_001082886.1  phosphofructokinase, muscle b

    See identical proteins and their annotated locations for NP_001082886.1

    Status: PROVISIONAL

    Source sequence(s)
    BC139532
    UniProtKB/TrEMBL
    A4QNV1
    Related
    ENSDARP00000079712.4, OTTDARP00000029291, ENSDART00000085277.4, OTTDART00000036511
    Conserved Domains (2) summary
    cd00764
    Location:13773
    Eukaryotic_PFK; Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent ...
    TIGR02478
    Location:16755
    6PF1K_euk; 6-phosphofructokinase, eukaryotic type

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    39739713..39772241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009302553.2XP_009300828.1  phosphofructokinase, muscle b isoform X1

    Conserved Domains (2) summary
    cd00764
    Location:136896
    Eukaryotic_PFK; Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent ...
    TIGR02478
    Location:139878
    6PF1K_euk; 6-phosphofructokinase, eukaryotic type

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394662.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    306604..331891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395261.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    215186..240926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_3

Genomic

  1. NW_018395382.1 Reference GRCz11 ALT_DRER_TU_3

    Range
    85372..110517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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