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nusap1 nucleolar and spindle associated protein 1 [ Danio rerio (zebrafish) ]

Gene ID: 567446, updated on 6-May-2021

Summary

Official Symbol
nusap1provided by ZNC
Official Full Name
nucleolar and spindle associated protein 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030827-5
See related
Ensembl:ENSDARG00000002403
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
an; YF-9; ankt; fb76a01; fi37a11; sb:cb49; sb:cb490; wu:fb76a01; wu:fi37a11
Orthologs
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Genomic context

See nusap1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (33251721..33256681, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (33121271..33126231, complement)
103 previous assembly Zv9 (GCF_000002035.4) 13 NC_007124.5 (33475323..33480283, complement)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene golgin A5 Neighboring gene RTF1 homolog, Paf1/RNA polymerase II complex component Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 1 Neighboring gene opa interacting protein 5 Neighboring gene oip5 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables microtubule binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in establishment of mitotic spindle localization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within establishment of mitotic spindle localization IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic chromosome condensation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic cytokinesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within neural crest cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitotic spindle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleolus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 
located_in spindle microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
nucleolar and spindle-associated protein 1
Names
nuSAP

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145694.1NP_001139166.1  nucleolar and spindle-associated protein 1

    See identical proteins and their annotated locations for NP_001139166.1

    Status: VALIDATED

    Source sequence(s)
    AW777914, BC124066, BX284673
    UniProtKB/Swiss-Prot
    A1L2F3
    Related
    ENSDARP00000015118.8, ENSDART00000003314.9
    Conserved Domains (1) summary
    pfam16006
    Location:158443
    NUSAP; Nucleolar and spindle-associated protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    33251721..33256681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017358779.2XP_017214268.1  nucleolar and spindle-associated protein 1 isoform X1

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