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Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase [ Mus musculus (house mouse) ]

Gene ID: 56737, updated on 21-Apr-2024

Summary

Official Symbol
Alg2provided by MGI
Official Full Name
ALG2 alpha-1,3/1,6-mannosyltransferaseprovided by MGI
Primary source
MGI:MGI:1914731
See related
Ensembl:ENSMUSG00000039740 AllianceGenome:MGI:1914731
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ALPG2; CDGIi; MNCb-5081; 1110018A23Rik; 1300013N08Rik
Summary
Predicted to enable several functions, including alpha-1,3-mannosyltransferase activity; calcium-dependent protein binding activity; and protein heterodimerization activity. Predicted to be involved in dolichol-linked oligosaccharide biosynthetic process; protein glycosylation in endoplasmic reticulum; and response to calcium ion. Predicted to be located in several cellular components, including actin cytoskeleton; cytosol; and perinuclear region of cytoplasm. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and sensory organ. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ii and congenital myasthenic syndrome 14. Orthologous to human ALG2 (ALG2 alpha-1,3/1,6-mannosyltransferase). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in adrenal adult (RPKM 51.1), CNS E18 (RPKM 41.7) and 26 other tissues See more
Orthologs
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Genomic context

Location:
4 B1; 4 26.03 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (47469833..47474367, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (47469833..47474367, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32435 Neighboring gene transforming growth factor, beta receptor I Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:47438228-47438411 Neighboring gene STARR-seq mESC enhancer starr_10143 Neighboring gene microfibrillar-associated protein 1B pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E3491 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:47487387-47487624 Neighboring gene SEC61 translocon subunit beta Neighboring gene predicted gene, 42283

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables alpha-1,3-mannosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables alpha-1,3-mannosyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables calcium-dependent protein binding ISO
Inferred from Sequence Orthology
more info
 
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in oligosaccharide-lipid intermediate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein glycosylation ISO
Inferred from Sequence Orthology
more info
 
involved_in response to calcium ion ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2
Names
GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase
GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
alpha-1,3-mannosyltransferase ALG2
asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)
asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase)
asparagine-linked glycosylation protein 2 homolog
NP_001342425.1
NP_064382.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355496.1NP_001342425.1  alpha-1,3/1,6-mannosyltransferase ALG2 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. The encoded isoform (2) has the same N- and C-termini, but is shorter than isoform 1.
    Source sequence(s)
    AI834815, BC052411, BU612370, BY129752
    Conserved Domains (1) summary
    cl10013
    Location:67334
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
  2. NM_019998.3NP_064382.3  alpha-1,3/1,6-mannosyltransferase ALG2 isoform 1

    See identical proteins and their annotated locations for NP_064382.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    BC052411, BG093758, BY129752
    Consensus CDS
    CCDS18161.1
    UniProtKB/Swiss-Prot
    Q7TN30, Q9CWI6, Q9DBE8, Q9JJA8
    Related
    ENSMUSP00000043580.3, ENSMUST00000044148.3
    Conserved Domains (1) summary
    cd03805
    Location:17407
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    47469833..47474367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)