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NRIP3 nuclear receptor interacting protein 3 [ Homo sapiens (human) ]

Gene ID: 56675, updated on 7-Jun-2020

Summary

Official Symbol
NRIP3provided by HGNC
Official Full Name
nuclear receptor interacting protein 3provided by HGNC
Primary source
HGNC:HGNC:1167
See related
Ensembl:ENSG00000175352 MIM:613125
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C11orf14; NY-SAR-105
Expression
Biased expression in testis (RPKM 15.1), brain (RPKM 14.4) and 4 other tissues See more
Orthologs

Genomic context

See NRIP3 in Genome Data Viewer
Location:
11p15.4
Exon count:
9
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (8980576..9004651, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (9002123..9025596, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene achaete-scute family bHLH transcription factor 3 Neighboring gene TMEM9 domain family member B Neighboring gene TMEM9B antisense RNA 1 Neighboring gene uncharacterized LOC105376541 Neighboring gene signal peptide, CUB domain and EGF like domain containing 2 Neighboring gene microRNA 5691 Neighboring gene keratin 8 pseudogene 41

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
proteolysis IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
nuclear receptor-interacting protein 3
Names
sarcoma antigen NY-SAR-105

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_020645.3NP_065696.1  nuclear receptor-interacting protein 3

    See identical proteins and their annotated locations for NP_065696.1

    Status: VALIDATED

    Source sequence(s)
    AC026894, BC008835, DA249943
    Consensus CDS
    CCDS31422.1
    UniProtKB/Swiss-Prot
    Q9NQ35
    Related
    ENSP00000310205.3, ENST00000309166.8
    Conserved Domains (1) summary
    cd05480
    Location:110212
    NRIP_C; NRIP_C; putative nuclear receptor interacting protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    8980576..9004651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024448608.1XP_024304376.1  nuclear receptor-interacting protein 3 isoform X1

    Conserved Domains (1) summary
    cd05480
    Location:42144
    NRIP_C; putative nuclear receptor interacting protein
  2. XM_024448609.1XP_024304377.1  nuclear receptor-interacting protein 3 isoform X1

    Conserved Domains (1) summary
    cd05480
    Location:42144
    NRIP_C; putative nuclear receptor interacting protein

RNA

  1. XR_001747927.1 RNA Sequence

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