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atcaya ATCAY kinesin light chain interacting caytaxin a [ Danio rerio (zebrafish) ]

Gene ID: 565827, updated on 3-Oct-2019

Summary

Official Symbol
atcayaprovided by ZNC
Official Full Name
ATCAY kinesin light chain interacting caytaxin aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-070705-185
See related
Ensembl:ENSDARG00000071678
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
BNIP-H; caytaxin; si:dkey-49m19.1; si:ch211-63j24.4
Orthologs

Genomic context

See atcaya in Genome Data Viewer
Location:
chromosome: 22
Exon count:
14
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (5102786..5116624)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (4722354..4732249)
103 previous assembly Zv9 (GCF_000002035.4) 22 NC_007133.5 (4743979..4757833)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene megakaryocyte-associated tyrosine kinase Neighboring gene zinc finger RNA binding protein 2 Neighboring gene muscle-specific beta 1 integrin binding protein Neighboring gene lysyl oxidase-like 5a

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
exopolyphosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
polyphosphate catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of synaptic transmission, cholinergic IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
caytaxin
Names
ataxia, cerebellar, Cayman type a

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    5102786..5116624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021469522.1XP_021325197.1  caytaxin isoform X1

    Related
    ENSDARP00000077909.5, ENSDART00000083474.6
    Conserved Domains (2) summary
    pfam12496
    Location:64189
    BNIP2; Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2
    pfam13716
    Location:191316
    CRAL_TRIO_2; Divergent CRAL/TRIO domain
  2. XM_009295950.3XP_009294225.1  caytaxin isoform X2

    UniProtKB/TrEMBL
    F6NPA8
    Related
    ENSDARP00000118536.1, ENSDART00000138967.2
    Conserved Domains (2) summary
    pfam12496
    Location:31156
    BNIP2; Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2
    pfam13716
    Location:158283
    CRAL_TRIO_2; Divergent CRAL/TRIO domain
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