fance FA complementation group E [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: fanceprovided by ZNC
Official Full Name: FA complementation group Eprovided by ZNC
Primary source: ZFIN:ZDB-GENE-060510-5
See related: Ensembl:ENSDARG00000068870 AllianceGenome:ZFIN:ZDB-GENE-060510-5
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to act upstream of or within interstrand cross-link repair. Predicted to be part of Fanconi anaemia nuclear complex. Is expressed in central nervous system and lens. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group E. Orthologous to human FANCE (FA complementation group E). [provided by Alliance of Genome Resources, Apr 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2025_04	current	GRCz12tu (GCF_049306965.1)	8	NC_133183.1 (25626250..25632205)
RS_2024_08	previous assembly	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (23731602..23737229)

Chromosome 8 - NC_133183.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

G46521 (e-PCR)
- UniSTS:107323

z8505 (e-PCR), detects polymorphism
- UniSTS:204970

fi27c05.x1 (e-PCR)
- UniSTS:204525

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within interstrand cross-link repair	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of Fanconi anaemia nuclear complex	IBA Inferred from Biological aspect of Ancestor more info
part_of Fanconi anaemia nuclear complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Fanconi anemia group E protein

Names: Fanconi anemia E; Fanconi anemia, complementation group E

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.